2c5l
From Proteopedia
(Difference between revisions)
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- | + | ==STRUCTURE OF PLC EPSILON RAS ASSOCIATION DOMAIN WITH HRAS== | |
- | + | <StructureSection load='2c5l' size='340' side='right' caption='[[2c5l]], [[Resolution|resolution]] 1.90Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[2c5l]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2C5L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2C5L FirstGlance]. <br> | ||
+ | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene><br> | ||
+ | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[121p|121p]], [[1aa9|1aa9]], [[1agp|1agp]], [[1bkd|1bkd]], [[1clu|1clu]], [[1crp|1crp]], [[1crq|1crq]], [[1crr|1crr]], [[1ctq|1ctq]], [[1gnp|1gnp]], [[1gnq|1gnq]], [[1gnr|1gnr]], [[1he8|1he8]], [[1iaq|1iaq]], [[1ioz|1ioz]], [[1jah|1jah]], [[1jai|1jai]], [[1k8r|1k8r]], [[1lf0|1lf0]], [[1lf5|1lf5]], [[1lfd|1lfd]], [[1nvu|1nvu]], [[1nvv|1nvv]], [[1nvw|1nvw]], [[1nvx|1nvx]], [[1p2s|1p2s]], [[1p2t|1p2t]], [[1p2u|1p2u]], [[1p2v|1p2v]], [[1plj|1plj]], [[1plk|1plk]], [[1pll|1pll]], [[1q21|1q21]], [[1qra|1qra]], [[1rvd|1rvd]], [[1wq1|1wq1]], [[1xcm|1xcm]], [[1xd2|1xd2]], [[1xj0|1xj0]], [[221p|221p]], [[2gdp|2gdp]], [[2q21|2q21]], [[421p|421p]], [[4q21|4q21]], [[521p|521p]], [[5p21|5p21]], [[621p|621p]], [[6q21|6q21]], [[721p|721p]], [[821p|821p]]</td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Small_monomeric_GTPase Small monomeric GTPase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.6.5.2 3.6.5.2] </span></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c5l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c5l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2c5l RCSB], [http://www.ebi.ac.uk/pdbsum/2c5l PDBsum]</span></td></tr> | ||
+ | <table> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c5/2c5l_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Ras proteins signal to a number of distinct pathways by interacting with diverse effectors. Studies of ras/effector interactions have focused on three classes, Raf kinases, ral guanylnucleotide-exchange factors, and phosphatidylinositol-3-kinases. Here we describe ras interactions with another effector, the recently identified phospholipase C epsilon (PLCepsilon). We solved structures of PLCepsilon RA domains (RA1 and RA2) by NMR and the structure of the RA2/ras complex by X-ray crystallography. Although the similarity between ubiquitin-like folds of RA1 and RA2 proves that they are homologs, only RA2 can bind ras. Some of the features of the RA2/ras interface are unique to PLCepsilon, while the ability to make contacts with both switch I and II regions of ras is shared only with phosphatidylinositol-3-kinase. Studies of PLCepsilon regulation suggest that, in a cellular context, the RA2 domain, in a mode specific to PLCepsilon, has a role in membrane targeting with further regulatory impact on PLC activity. | ||
- | + | Structural and mechanistic insights into ras association domains of phospholipase C epsilon.,Bunney TD, Harris R, Gandarillas NL, Josephs MB, Roe SM, Sorli SC, Paterson HF, Rodrigues-Lima F, Esposito D, Ponting CP, Gierschik P, Pearl LH, Driscoll PC, Katan M Mol Cell. 2006 Feb 17;21(4):495-507. PMID:16483931<ref>PMID:16483931</ref> | |
- | + | ||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
==See Also== | ==See Also== | ||
*[[GTPase HRas|GTPase HRas]] | *[[GTPase HRas|GTPase HRas]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Small monomeric GTPase]] | [[Category: Small monomeric GTPase]] |
Revision as of 03:08, 30 September 2014
STRUCTURE OF PLC EPSILON RAS ASSOCIATION DOMAIN WITH HRAS
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Categories: Homo sapiens | Small monomeric GTPase | Bunney, T D. | Katan, M. | Pearl, L H. | Roe, S M. | Disease mutation | Gtp-binding | Lipoprotein | Nucleotide- binding | Oncogene | Palmitate | Prenylation | Proto-oncogene | Ra | Signaling protein | Signaling protein-complex | Ubiquitin superfold