2ppx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2ppx" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2ppx.png|left|200px]]
+
==Crystal structure of a HTH XRE-family like protein from Agrobacterium tumefaciens==
-
 
+
<StructureSection load='2ppx' size='340' side='right' caption='[[2ppx]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
{{STRUCTURE_2ppx| PDB=2ppx | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2ppx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PPX FirstGlance]. <br>
-
===Crystal structure of a HTH XRE-family like protein from Agrobacterium tumefaciens===
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Atu1735, AGR_C_3184 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
-
==About this Structure==
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ppx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ppx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ppx RCSB], [http://www.ebi.ac.uk/pdbsum/2ppx PDBsum], [http://www.topsan.org/Proteins/MCSG/2ppx TOPSAN]</span></td></tr>
-
[[2ppx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PPX OCA].
+
<table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pp/2ppx_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Agrobacterium tumefaciens str. c58]]
[[Category: Agrobacterium tumefaciens str. c58]]
[[Category: Cuff, M E.]]
[[Category: Cuff, M E.]]

Revision as of 19:12, 30 September 2014

Crystal structure of a HTH XRE-family like protein from Agrobacterium tumefaciens

2ppx, resolution 2.00Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox