This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2oqt

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2oqt" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:2oqt.png|left|200px]]
+
==Structural Genomics, the crystal structure of a putative PTS IIA domain from Streptococcus pyogenes M1 GAS==
-
 
+
<StructureSection load='2oqt' size='340' side='right' caption='[[2oqt]], [[Resolution|resolution]] 2.41&Aring;' scene=''>
-
{{STRUCTURE_2oqt| PDB=2oqt | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2oqt]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_m1 Streptococcus pyogenes serotype m1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OQT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2OQT FirstGlance]. <br>
-
===Structural Genomics, the crystal structure of a putative PTS IIA domain from Streptococcus pyogenes M1 GAS===
+
</td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SPy0176 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=301447 Streptococcus pyogenes serotype M1])</td></tr>
-
 
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2oqt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oqt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2oqt RCSB], [http://www.ebi.ac.uk/pdbsum/2oqt PDBsum], [http://www.topsan.org/Proteins/MCSG/2oqt TOPSAN]</span></td></tr>
-
==About this Structure==
+
<table>
-
[[2oqt]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_serotype_m1 Streptococcus pyogenes serotype m1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OQT OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/2oqt_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Streptococcus pyogenes serotype m1]]
[[Category: Streptococcus pyogenes serotype m1]]
[[Category: Clancy, S.]]
[[Category: Clancy, S.]]

Revision as of 19:27, 30 September 2014

Structural Genomics, the crystal structure of a putative PTS IIA domain from Streptococcus pyogenes M1 GAS

2oqt, resolution 2.41Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2oqt"
Views
Personal tools
Navigation
Toolbox