2wko
From Proteopedia
(Difference between revisions)
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- | + | ==STRUCTURE OF METAL LOADED PATHOGENIC SOD1 MUTANT G93A.== | |
- | + | <StructureSection load='2wko' size='340' side='right' caption='[[2wko]], [[Resolution|resolution]] 1.97Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[2wko]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WKO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WKO FirstGlance]. <br> | ||
+ | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br> | ||
+ | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1l3n|1l3n]], [[2af2|2af2]], [[1uxl|1uxl]], [[1ptz|1ptz]], [[1oez|1oez]], [[2vr8|2vr8]], [[1rk7|1rk7]], [[2vr7|2vr7]], [[1hl4|1hl4]], [[1azv|1azv]], [[2c9s|2c9s]], [[1mfm|1mfm]], [[2v0a|2v0a]], [[4sod|4sod]], [[1ozu|1ozu]], [[1dsw|1dsw]], [[2vr6|2vr6]], [[1kmg|1kmg]], [[1ozt|1ozt]], [[2c9v|2c9v]], [[1n18|1n18]], [[1ba9|1ba9]], [[1pu0|1pu0]], [[1fun|1fun]], [[1sos|1sos]], [[1n19|1n19]], [[2c9u|2c9u]], [[1hl5|1hl5]], [[1p1v|1p1v]], [[1spd|1spd]], [[1uxm|1uxm]], [[3gzo|3gzo]], [[3gzp|3gzp]], [[3gzq|3gzq]]</td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_dismutase Superoxide dismutase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.1 1.15.1.1] </span></td></tr> | ||
+ | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wko FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wko OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wko RCSB], [http://www.ebi.ac.uk/pdbsum/2wko PDBsum]</span></td></tr> | ||
+ | <table> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wk/2wko_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Amyotrophic lateral sclerosis (ALS) is a fatal, progressive neurodegenerative disease characterized by the destruction of motor neurons in the spinal cord and brain. A subset of ALS cases are linked to dominant mutations in copper-zinc superoxide dismutase (SOD1). The pathogenic SOD1 variants A4V and G93A have been the foci of multiple studies aimed at understanding the molecular basis for SOD1-linked ALS. The A4V variant is responsible for the majority of familial ALS cases in North America, causing rapidly progressing paralysis once symptoms begin and the G93A SOD1 variant is overexpressed in often studied murine models of the disease. Here we report the three-dimensional structures of metal-free A4V and of metal-bound and metal-free G93A SOD1. In the metal-free structures, the metal-binding loop elements are observed to be severely disordered, suggesting that these variants may share mechanisms of aggregation proposed previously for other pathogenic SOD1 proteins. | ||
- | + | Structural and biophysical properties of metal-free pathogenic SOD1 mutants A4V and G93A.,Galaleldeen A, Strange RW, Whitson LJ, Antonyuk SV, Narayana N, Taylor AB, Schuermann JP, Holloway SP, Hasnain SS, Hart PJ Arch Biochem Biophys. 2009 Dec;492(1-2):40-7. Epub 2009 Oct 1. PMID:19800308<ref>PMID:19800308</ref> | |
- | + | ||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
==See Also== | ==See Also== | ||
*[[Superoxide Dismutase|Superoxide Dismutase]] | *[[Superoxide Dismutase|Superoxide Dismutase]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Superoxide dismutase]] | [[Category: Superoxide dismutase]] |
Revision as of 01:20, 1 October 2014
STRUCTURE OF METAL LOADED PATHOGENIC SOD1 MUTANT G93A.
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Categories: Homo sapiens | Superoxide dismutase | Antonyuk, S V. | Galaleldeen, A. | Hart, P J. | Hasnain, S S. | Holloway, S P. | Narayana, N. | Schuermann, J P. | Strange, R. | Taylor, A. | Whitson, L. | Amyotrophic lateral sclerosis | Antioxidant | Disease mutation | Metal-binding | Neurodegeneration | Oxidoreductase | Phosphoprotein