2weh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{STRUCTURE_2weh| PDB=2weh | SCENE= }}
+
==THERMODYNAMIC OPTIMISATION OF CARBONIC ANHYDRASE FRAGMENT INHIBITORS==
-
===THERMODYNAMIC OPTIMISATION OF CARBONIC ANHYDRASE FRAGMENT INHIBITORS===
+
<StructureSection load='2weh' size='340' side='right' caption='[[2weh]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Disease==
+
<table><tr><td colspan='2'>[[2weh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WEH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WEH FirstGlance]. <br>
-
[[http://www.uniprot.org/uniprot/CAH2_HUMAN CAH2_HUMAN]] Defects in CA2 are the cause of osteopetrosis autosomal recessive type 3 (OPTB3) [MIM:[http://omim.org/entry/259730 259730]]; also known as osteopetrosis with renal tubular acidosis, carbonic anhydrase II deficiency syndrome, Guibaud-Vainsel syndrome or marble brain disease. Osteopetrosis is a rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. The disorder occurs in two forms: a severe autosomal recessive form occurring in utero, infancy, or childhood, and a benign autosomal dominant form occurring in adolescence or adulthood. Autosomal recessive osteopetrosis is usually associated with normal or elevated amount of non-functional osteoclasts. OPTB3 is associated with renal tubular acidosis, cerebral calcification (marble brain disease) and in some cases with mental retardation.<ref>PMID:1928091</ref><ref>PMID:1542674</ref><ref>PMID:8834238</ref><ref>PMID:9143915</ref><ref>PMID:15300855</ref>
+
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FB1:2-CHLOROBENZENESULFONAMIDE'>FB1</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br>
-
 
+
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1okl|1okl]], [[1i9q|1i9q]], [[1zfq|1zfq]], [[1if7|1if7]], [[1cam|1cam]], [[1t9n|1t9n]], [[1cnw|1cnw]], [[1okn|1okn]], [[1f2w|1f2w]], [[1g52|1g52]], [[2h4n|2h4n]], [[1bnm|1bnm]], [[1cnh|1cnh]], [[1bnq|1bnq]], [[1ugc|1ugc]], [[1xev|1xev]], [[1if9|1if9]], [[1ugg|1ugg]], [[1g53|1g53]], [[1fqm|1fqm]], [[1ca2|1ca2]], [[1fql|1fql]], [[1cal|1cal]], [[1i9n|1i9n]], [[1g4o|1g4o]], [[2cba|2cba]], [[1ydc|1ydc]], [[1ccs|1ccs]], [[1lzv|1lzv]], [[1bnv|1bnv]], [[1fqr|1fqr]], [[1a42|1a42]], [[1rzb|1rzb]], [[1th9|1th9]], [[1zsb|1zsb]], [[1cnb|1cnb]], [[1hed|1hed]], [[1i8z|1i8z]], [[1g48|1g48]], [[1lg5|1lg5]], [[1bv3|1bv3]], [[1g0f|1g0f]], [[1tg3|1tg3]], [[1cvc|1cvc]], [[1ugd|1ugd]], [[1yo0|1yo0]], [[1i90|1i90]], [[2wd3|2wd3]], [[1hva|1hva]], [[1fsn|1fsn]], [[1rze|1rze]], [[1ugb|1ugb]], [[1z9y|1z9y]], [[2fmz|2fmz]], [[1cnk|1cnk]], [[1bn1|1bn1]], [[1teq|1teq]], [[1rza|1rza]], [[2vvb|2vvb]], [[1ccu|1ccu]], [[1i9l|1i9l]], [[2cbc|2cbc]], [[1g46|1g46]], [[1cvb|1cvb]], [[1cao|1cao]], [[1fsq|1fsq]], [[6ca2|6ca2]], [[5ca2|5ca2]], [[1g1d|1g1d]], [[1caj|1caj]], [[1cvf|1cvf]], [[2fou|2fou]], [[1lgd|1lgd]], [[1if6|1if6]], [[1bn4|1bn4]], [[1teu|1teu]], [[1cra|1cra]], [[1if4|1if4]], [[1ze8|1ze8]], [[1hea|1hea]], [[1cah|1cah]], [[1hca|1hca]], [[1g4j|1g4j]], [[1raz|1raz]], [[1kwq|1kwq]], [[1cim|1cim]], [[1cvh|1cvh]], [[1cin|1cin]], [[1if8|1if8]], [[1i9m|1i9m]], [[1zfk|1zfk]], [[1fqn|1fqn]], [[1zsa|1zsa]], [[1lg6|1lg6]], [[1cnc|1cnc]], [[1uga|1uga]], [[1bnn|1bnn]], [[1tb0|1tb0]], [[2foq|2foq]], [[1cai|1cai]], [[2ax2|2ax2]], [[1dcb|1dcb]], [[1cnx|1cnx]], [[2hd6|2hd6]], [[5cac|5cac]], [[4cac|4cac]], [[1ttm|1ttm]], [[1cak|1cak]], [[1i9o|1i9o]], [[1cni|1cni]], [[1can|1can]], [[1yda|1yda]], [[2eu3|2eu3]], [[2wd2|2wd2]], [[1eou|1eou]], [[1yo2|1yo2]], [[1mua|1mua]], [[2ca2|2ca2]], [[1cct|1cct]], [[2abe|2abe]], [[1oq5|1oq5]], [[1rzc|1rzc]], [[1ugf|1ugf]], [[1thk|1thk]], [[2cbe|2cbe]], [[1kwr|1kwr]], [[1zgf|1zgf]], [[1cay|1cay]], [[1moo|1moo]], [[1cng|1cng]], [[2ez7|2ez7]], [[1hec|1hec]], [[8ca2|8ca2]], [[9ca2|9ca2]], [[1fr7|1fr7]], [[1zh9|1zh9]], [[1ydd|1ydd]], [[1lug|1lug]], [[1bic|1bic]], [[1caz|1caz]], [[7ca2|7ca2]], [[1cvd|1cvd]], [[1fr4|1fr4]], [[2geh|2geh]], [[4ca2|4ca2]], [[1cil|1cil]], [[1g45|1g45]], [[1ydb|1ydb]], [[1dca|1dca]], [[1fsr|1fsr]], [[2cbb|2cbb]], [[1avn|1avn]], [[1i9p|1i9p]], [[12ca|12ca]], [[1bcd|1bcd]], [[1i91|1i91]], [[1am6|1am6]], [[1cve|1cve]], [[1g3z|1g3z]], [[1heb|1heb]], [[2cbd|2cbd]], [[1zsc|1zsc]], [[1bnu|1bnu]], [[3ca2|3ca2]], [[1bnw|1bnw]], [[1zge|1zge]], [[1te3|1te3]], [[2fov|2fov]], [[1bnt|1bnt]], [[1if5|1if5]], [[1yo1|1yo1]], [[1rzd|1rzd]], [[1g54|1g54]], [[1uge|1uge]], [[1g0e|1g0e]], [[2fmg|2fmg]], [[1ray|1ray]], [[1cva|1cva]], [[1ca3|1ca3]], [[2eu2|2eu2]], [[1tg9|1tg9]], [[1tbt|1tbt]], [[1xeg|1xeg]], [[1bn3|1bn3]], [[1cny|1cny]], [[1okm|1okm]], [[1cnj|1cnj]], [[1h9n|1h9n]], [[2vva|2vva]], [[2aw1|2aw1]], [[1h4n|1h4n]], [[2fos|2fos]], [[1h9q|1h9q]], [[2weg|2weg]], [[2wej|2wej]], [[2weo|2weo]]</td></tr>
-
==Function==
+
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Carbonate_dehydratase Carbonate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.1 4.2.1.1] </span></td></tr>
-
[[http://www.uniprot.org/uniprot/CAH2_HUMAN CAH2_HUMAN]] Essential for bone resorption and osteoclast differentiation (By similarity). Reversible hydration of carbon dioxide. Can hydrate cyanamide to urea. Involved in the regulation of fluid secretion into the anterior chamber of the eye.<ref>PMID:10550681</ref><ref>PMID:11831900</ref>
+
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2weh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2weh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2weh RCSB], [http://www.ebi.ac.uk/pdbsum/2weh PDBsum]</span></td></tr>
-
 
+
<table>
-
==About this Structure==
+
== Disease ==
-
[[2weh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WEH OCA].
+
[[http://www.uniprot.org/uniprot/CAH2_HUMAN CAH2_HUMAN]] Defects in CA2 are the cause of osteopetrosis autosomal recessive type 3 (OPTB3) [MIM:[http://omim.org/entry/259730 259730]]; also known as osteopetrosis with renal tubular acidosis, carbonic anhydrase II deficiency syndrome, Guibaud-Vainsel syndrome or marble brain disease. Osteopetrosis is a rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. The disorder occurs in two forms: a severe autosomal recessive form occurring in utero, infancy, or childhood, and a benign autosomal dominant form occurring in adolescence or adulthood. Autosomal recessive osteopetrosis is usually associated with normal or elevated amount of non-functional osteoclasts. OPTB3 is associated with renal tubular acidosis, cerebral calcification (marble brain disease) and in some cases with mental retardation.<ref>PMID:1928091</ref> <ref>PMID:1542674</ref> <ref>PMID:8834238</ref> <ref>PMID:9143915</ref> <ref>PMID:15300855</ref>
 +
== Function ==
 +
[[http://www.uniprot.org/uniprot/CAH2_HUMAN CAH2_HUMAN]] Essential for bone resorption and osteoclast differentiation (By similarity). Reversible hydration of carbon dioxide. Can hydrate cyanamide to urea. Involved in the regulation of fluid secretion into the anterior chamber of the eye.<ref>PMID:10550681</ref> <ref>PMID:11831900</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/we/2weh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Carbonic anhydrase|Carbonic anhydrase]]
*[[Carbonic anhydrase|Carbonic anhydrase]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:019882701</ref><references group="xtra"/><references/>
+
__TOC__
 +
</StructureSection>
[[Category: Carbonate dehydratase]]
[[Category: Carbonate dehydratase]]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]

Revision as of 01:37, 1 October 2014

THERMODYNAMIC OPTIMISATION OF CARBONIC ANHYDRASE FRAGMENT INHIBITORS

2weh, resolution 2.09Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Views
Personal tools
Navigation
Toolbox