1ioz

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[[Image:1ioz.gif|left|200px]]<br /><applet load="1ioz" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1ioz.gif|left|200px]]
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caption="1ioz, resolution 2.0&Aring;" />
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'''CRYSTAL STRUCTURE OF THE C-HA-RAS PROTEIN PREPARED BY THE CELL-FREE SYNTHESIS'''<br />
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{{Structure
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|PDB= 1ioz |SIZE=350|CAPTION= <scene name='initialview01'>1ioz</scene>, resolution 2.0&Aring;
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|SITE=
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|LIGAND= <scene name='pdbligand=GDP:GUANOSINE-5'-DIPHOSPHATE'>GDP</scene>
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|ACTIVITY=
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|GENE=
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}}
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'''CRYSTAL STRUCTURE OF THE C-HA-RAS PROTEIN PREPARED BY THE CELL-FREE SYNTHESIS'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1IOZ is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with <scene name='pdbligand=GDP:'>GDP</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IOZ OCA].
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1IOZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IOZ OCA].
==Reference==
==Reference==
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Selenomethionine incorporation into a protein by cell-free synthesis., Kigawa T, Yamaguchi-Nunokawa E, Kodama K, Matsuda T, Yabuki T, Matsuda N, Ishitani R, Nureki O, Yokoyama S, J Struct Funct Genomics. 2002;2(1):29-35. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12836672 12836672]
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Selenomethionine incorporation into a protein by cell-free synthesis., Kigawa T, Yamaguchi-Nunokawa E, Kodama K, Matsuda T, Yabuki T, Matsuda N, Ishitani R, Nureki O, Yokoyama S, J Struct Funct Genomics. 2002;2(1):29-35. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12836672 12836672]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: gtp-binding protein]]
[[Category: gtp-binding protein]]
[[Category: oncogene protein]]
[[Category: oncogene protein]]
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[[Category: ras]]
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[[Category: ra]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: rsgi]]
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[[Category: structural genomics]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:14:05 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 11:53:05 2008''

Revision as of 09:53, 20 March 2008


PDB ID 1ioz

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, resolution 2.0Å
Ligands:
Coordinates: save as pdb, mmCIF, xml



CRYSTAL STRUCTURE OF THE C-HA-RAS PROTEIN PREPARED BY THE CELL-FREE SYNTHESIS


Contents

Overview

Multi-wavelength anomalous diffraction phasing is especially useful for high-throughput structure determinations. Selenomethionine substituted proteins are commonly used for this purpose. However, the cytotoxicity of selenomethionine drastically reduces the efficiency of its incorporation in in vivo expression systems. In the present study, an improved E. coli cell-free protein synthesis system was used to incorporate selenomethionine into a protein, so that highly efficient incorporation could be achieved. A milligram quantity of selenomethionine-containing Ras was obtained using the cell-free system with dialysis. The mass spectrometry analysis showed that more than 95% of the methionine residues were substituted with selenomethionine. The crystal of this protein grew under the same conditions and had the same unit cell constants as those of the native Ras protein. The three-dimensional structure of this protein, determined by multi-wavelength anomalous diffraction phasing, was almost the same as that of the Ras protein prepared by in vivo expression. Therefore, the cell-free synthesis system could become a powerful protein expression method for high-throughput structure determinations by X-ray crystallography.

Disease

Known diseases associated with this structure: Bladder cancer, somatic OMIM:[190020], Costello syndrome OMIM:[190020], Thyroid carcinoma, follicular, somatic OMIM:[190020]

About this Structure

1IOZ is a Single protein structure of sequence from Homo sapiens. Full crystallographic information is available from OCA.

Reference

Selenomethionine incorporation into a protein by cell-free synthesis., Kigawa T, Yamaguchi-Nunokawa E, Kodama K, Matsuda T, Yabuki T, Matsuda N, Ishitani R, Nureki O, Yokoyama S, J Struct Funct Genomics. 2002;2(1):29-35. PMID:12836672

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