This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2yt5
From Proteopedia
m (Protected "2yt5" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Solution structure of the PHD domain of Metal-response element-binding transcription factor 2== | |
| - | + | <StructureSection load='2yt5' size='340' side='right' caption='[[2yt5]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2yt5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YT5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2YT5 FirstGlance]. <br> | |
| - | + | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene><br> | |
| - | + | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Mtf2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])</td></tr> | |
| - | + | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2yt5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yt5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2yt5 RCSB], [http://www.ebi.ac.uk/pdbsum/2yt5 PDBsum]</span></td></tr> | |
| - | == | + | <table> |
| - | [[2yt5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YT5 OCA]. | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yt/2yt5_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
[[Category: Harada, T.]] | [[Category: Harada, T.]] | ||
Revision as of 04:49, 2 October 2014
Solution structure of the PHD domain of Metal-response element-binding transcription factor 2
| |||||||||||
Categories: Mus musculus | Harada, T. | Isono, K. | Kigawa, T. | Koseki, H. | Masuda, K. | Muto, Y. | RSGI, RIKEN Structural Genomics/Proteomics Initiative. | Watanabe, S. | Yokoyama, S. | Metal-regulatory transcription factor 2 | Metal-response element dna-binding protein m96 | Metal-response element-binding transcription factor 2 | National project on protein structural and functional analyse | Nppsfa | Pcl2 | Phd domain | Riken structural genomics/proteomics initiative | Rsgi | Structural genomic | Transcription | Zinc-regulated factor 1 | Zirf1

