1j1h

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[[Image:1j1h.gif|left|200px]]<br /><applet load="1j1h" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1j1h.gif|left|200px]]
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caption="1j1h" />
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'''Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus'''<br />
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{{Structure
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|PDB= 1j1h |SIZE=350|CAPTION= <scene name='initialview01'>1j1h</scene>
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|SITE=
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|LIGAND=
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|ACTIVITY=
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'''Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1J1H is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1H OCA].
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1J1H is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J1H OCA].
==Reference==
==Reference==
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Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus., Someya T, Nameki N, Hosoi H, Suzuki S, Hatanaka H, Fujii M, Terada T, Shirouzu M, Inoue Y, Shibata T, Kuramitsu S, Yokoyama S, Kawai G, FEBS Lett. 2003 Jan 30;535(1-3):94-100. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12560085 12560085]
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Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus., Someya T, Nameki N, Hosoi H, Suzuki S, Hatanaka H, Fujii M, Terada T, Shirouzu M, Inoue Y, Shibata T, Kuramitsu S, Yokoyama S, Kawai G, FEBS Lett. 2003 Jan 30;535(1-3):94-100. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12560085 12560085]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
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[[Category: smpb]]
[[Category: smpb]]
[[Category: ssra associated protein]]
[[Category: ssra associated protein]]
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[[Category: structural genomics]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 13:17:56 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 11:57:42 2008''

Revision as of 09:57, 20 March 2008

Image:1j1h.gif


PDB ID 1j1h

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Coordinates: save as pdb, mmCIF, xml



Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus


Overview

Small protein B (SmpB) is required for trans-translation, binding specifically to tmRNA. We show here the solution structure of SmpB from an extremely thermophilic bacterium, Thermus thermophilus HB8, determined by heteronuclear nuclear magnetic resonance methods. The core of the protein consists of an antiparallel beta-barrel twisted up from eight beta-strands, each end of which is capped with the second or third helix, and the first helix is located beside the barrel. Its C-terminal sequence (20 residues), which is rich in basic residues, shows a poorly structured form, as often seen in isolated ribosomal proteins. The results are discussed in relation to the oligonucleotide binding fold.

About this Structure

1J1H is a Single protein structure of sequence from Thermus thermophilus. Full crystallographic information is available from OCA.

Reference

Solution structure of a tmRNA-binding protein, SmpB, from Thermus thermophilus., Someya T, Nameki N, Hosoi H, Suzuki S, Hatanaka H, Fujii M, Terada T, Shirouzu M, Inoue Y, Shibata T, Kuramitsu S, Yokoyama S, Kawai G, FEBS Lett. 2003 Jan 30;535(1-3):94-100. PMID:12560085

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