This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3cvg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3cvg" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3cvg.png|left|200px]]
+
==Crystal structure of a periplasmic putative metal binding protein==
-
 
+
<StructureSection load='3cvg' size='340' side='right' caption='[[3cvg]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
-
{{STRUCTURE_3cvg| PDB=3cvg | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3cvg]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Coccidioides_immitis Coccidioides immitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CVG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3CVG FirstGlance]. <br>
-
===Crystal structure of a periplasmic putative metal binding protein===
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
-
 
+
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CIMG_05057 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5501 Coccidioides immitis])</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3cvg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cvg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3cvg RCSB], [http://www.ebi.ac.uk/pdbsum/3cvg PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3cvg TOPSAN]</span></td></tr>
-
[[3cvg]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Coccidioides_immitis Coccidioides immitis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CVG OCA].
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cv/3cvg_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Coccidioides immitis]]
[[Category: Coccidioides immitis]]
[[Category: Agarwal, R.]]
[[Category: Agarwal, R.]]

Revision as of 05:47, 10 October 2014

Crystal structure of a periplasmic putative metal binding protein

3cvg, resolution 1.97Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools