3r0r

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[[Image:3r0r.png|left|200px]]
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==The 2.3 A structure of porcine circovirus 2==
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<StructureSection load='3r0r' size='340' side='right' caption='[[3r0r]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3r0r]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R0R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R0R FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r0r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r0r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r0r RCSB], [http://www.ebi.ac.uk/pdbsum/3r0r PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Porcine circovirus 2 (PCV2) is a T=1 non-enveloped icosahedral virus that has had severe impact on the swine industry. Here we report the crystal structure of an N-terminally truncated PCV2 virus-like particle at 2.3 A resolution, and the cryo-EM image reconstruction of a full length PCV2 virus-like particle at 9.6 A resolution. This is the first atomic structure of a Circovirus. The crystal structure revealed that the capsid protein fold is a canonical viral jelly-roll. The loops connecting the strands of the jelly-roll define the limited features of the surface. Sulfate ions interacting with the surface, and electrostatic potential calculations strongly suggest a heparan sulfate binding site that allows PCV2 to gain entry into the cell. The crystal structure also allowed previously determined epitopes of the capsid to be visualized. The cryo-EM image reconstruction showed that the location of the N-terminus, absent in the crystal structure, is inside the capsid. As the N-terminus was previously shown to be antigenic it may externalize through viral 'breathing'.
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{{STRUCTURE_3r0r| PDB=3r0r | SCENE= }}
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The 2.3 A Structure of Porcine Circovirus 2.,Khayat R, Brunn N, Speir JA, Hardham JM, Ankenbauer RG, Schneemann A, Johnson JE J Virol. 2011 Jun 1. PMID:21632760<ref>PMID:21632760</ref>
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===The 2.3 A structure of porcine circovirus 2===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_21632760}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[3r0r]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Porcine_circovirus_2 Porcine circovirus 2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R0R OCA].
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</StructureSection>
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==See Also==
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*[[Virus coat protein|Virus coat protein]]
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==Reference==
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<ref group="xtra">PMID:021632760</ref><references group="xtra"/>
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[[Category: Porcine circovirus 2]]
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[[Category: Johnson, J E.]]
[[Category: Johnson, J E.]]
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[[Category: Khayat, R]]
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[[Category: Khayat, R.]]
[[Category: Speir, J A.]]
[[Category: Speir, J A.]]
[[Category: Beta barrel]]
[[Category: Beta barrel]]

Revision as of 09:07, 29 October 2014

The 2.3 A structure of porcine circovirus 2

3r0r, resolution 2.35Å

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