3r3j

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[[Image:3r3j.png|left|200px]]
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==Kinetic and structural characterization of Plasmodium falciparum glutamate dehydrogenase 2==
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<StructureSection load='3r3j' size='340' side='right' caption='[[3r3j]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3r3j]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R3J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R3J FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF14_0286 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5833 Plasmodium falciparum])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glutamate_dehydrogenase_(NAD(P)(+)) Glutamate dehydrogenase (NAD(P)(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.4.1.3 1.4.1.3] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r3j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r3j OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r3j RCSB], [http://www.ebi.ac.uk/pdbsum/3r3j PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Glutamate dehydrogenases (GDHs) play key roles in cellular redox, amino acid, and energy metabolism, thus representing potential targets for pharmacological interventions. Here we studied the functional network provided by the three known glutamate dehydrogenases of the malaria parasite Plasmodium falciparum. The recombinant production of the previously described PfGDH1 as hexahistidyl-tagged proteins was optimized. Additionally, PfGDH2 was cloned, recombinantly produced, and characterized. Like PfGDH1, PfGDH2 is an NADP(H)-dependent enzyme with a specific activity comparable to PfGDH1 but with slightly higher K(m) values for its substrates. The three-dimensional structure of hexameric PfGDH2 was solved to 3.1A resolution. The overall structure shows high similarity with PfGDH1 but with significant differences occurring at the subunit interface. As in mammalian GDH1, in PfGDH2 the subunit-subunit interactions are mainly assisted by hydrogen bonds and hydrophobic interactions, whereas in PfGDH1 these contacts are mediated by networks of salt bridges and hydrogen bonds. In accordance with this, the known bovine GDH inhibitors hexachlorophene, GW5074, and bithionol were more effective on PfGDH2 than on PfGDH1. Subcellular localization was determined for all three plasmodial GDHs by fusion with the green fluorescent protein. Based on our data, PfGDH1 and PfGDH3 are cytosolic proteins whereas PfGDH2 clearly localizes to the apicoplast, a plastid-like organelle specific for apicomplexan parasites. This study provides new insights into the structure and function of GDH isoenzymes of P. falciparum, which represent potential targets for the development of novel antimalarial drugs.
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{{STRUCTURE_3r3j| PDB=3r3j | SCENE= }}
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Biochemical and structural characterization of Plasmodium falciparum glutamate dehydrogenase 2.,Zocher K, Fritz-Wolf K, Kehr S, Fischer M, Rahlfs S, Becker K Mol Biochem Parasitol. 2012 Feb 9. PMID:22342964<ref>PMID:22342964</ref>
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===Kinetic and structural characterization of Plasmodium falciparum glutamate dehydrogenase 2===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_22342964}}
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==About this Structure==
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[[3r3j]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R3J OCA].
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==See Also==
==See Also==
*[[Glutamate dehydrogenase|Glutamate dehydrogenase]]
*[[Glutamate dehydrogenase|Glutamate dehydrogenase]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:022342964</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Plasmodium falciparum]]
[[Category: Plasmodium falciparum]]
[[Category: Becker, K.]]
[[Category: Becker, K.]]
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[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: Plasmodium falciparum]]
[[Category: Plasmodium falciparum]]
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[[Category: Rossman fold]]
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[[Category: Rossmann fold]]

Revision as of 14:02, 3 November 2014

Kinetic and structural characterization of Plasmodium falciparum glutamate dehydrogenase 2

3r3j, resolution 3.10Å

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