This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3ewb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3ewb" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3ewb.png|left|200px]]
+
==Crystal structure of N-terminal domain of putative 2-isopropylmalate synthase from Listeria monocytogenes==
-
 
+
<StructureSection load='3ewb' size='340' side='right' caption='[[3ewb]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
{{STRUCTURE_3ewb| PDB=3ewb | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3ewb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3EWB FirstGlance]. <br>
-
===Crystal structure of N-terminal domain of putative 2-isopropylmalate synthase from Listeria monocytogenes===
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">leuA, LMOf2365_2010 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=265669 Listeria monocytogenes serotype 4b str. F2365])</td></tr>
-
 
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/2-isopropylmalate_synthase 2-isopropylmalate synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.3.13 2.3.3.13] </span></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ewb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ewb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ewb RCSB], [http://www.ebi.ac.uk/pdbsum/3ewb PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3ewb TOPSAN]</span></td></tr>
-
[[3ewb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3EWB OCA].
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ew/3ewb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: 2-isopropylmalate synthase]]
[[Category: 2-isopropylmalate synthase]]
[[Category: Listeria monocytogenes serotype 4b str. f2365]]
[[Category: Listeria monocytogenes serotype 4b str. f2365]]
-
[[Category: Almo, S C.]]
+
[[Category: Almo, S C]]
-
[[Category: Burley, S K.]]
+
[[Category: Burley, S K]]
-
[[Category: Gilmore, M.]]
+
[[Category: Gilmore, M]]
-
[[Category: Hu, S.]]
+
[[Category: Hu, S]]
-
[[Category: Maletic, M.]]
+
[[Category: Maletic, M]]
-
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+
[[Category: Structural genomic]]
-
[[Category: Ramagopal, U A.]]
+
[[Category: Ramagopal, U A]]
-
[[Category: Rodgers, L.]]
+
[[Category: Rodgers, L]]
-
[[Category: Toro, R.]]
+
[[Category: Toro, R]]
[[Category: Amino-acid biosynthesis]]
[[Category: Amino-acid biosynthesis]]
[[Category: Branched-chain amino acid biosynthesis]]
[[Category: Branched-chain amino acid biosynthesis]]
[[Category: Leua]]
[[Category: Leua]]
[[Category: Leucine biosynthesis]]
[[Category: Leucine biosynthesis]]
-
[[Category: New york sgx research center for structural genomic]]
+
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
-
[[Category: Nysgxrc]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Transferase]]
[[Category: Transferase]]
[[Category: Unknown function]]
[[Category: Unknown function]]

Revision as of 12:57, 6 November 2014

Crystal structure of N-terminal domain of putative 2-isopropylmalate synthase from Listeria monocytogenes

3ewb, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools