3ly0
From Proteopedia
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| - | + | ==Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala== | |
| - | + | <StructureSection load='3ly0' size='340' side='right' caption='[[3ly0]], [[Resolution|resolution]] 1.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3ly0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LY0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LY0 FirstGlance]. <br> |
| - | [[3ly0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_sphaeroides Rhodobacter sphaeroides]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LY0 OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=LY0:(2R)-3-[(R)-[(1R)-1-AMINOETHYL](HYDROXY)PHOSPHORYL]-2-METHYLPROPANOIC+ACID'>LY0</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RHOS4_24130, RSP_0802 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1063 Rhodobacter sphaeroides])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ly0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ly0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ly0 RCSB], [http://www.ebi.ac.uk/pdbsum/3ly0 PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/3ly0_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Rhodobacter sphaeroides]] | [[Category: Rhodobacter sphaeroides]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Cummings, J | + | [[Category: Cummings, J]] |
| - | [[Category: Fedorov, A A | + | [[Category: Fedorov, A A]] |
| - | [[Category: Fedorov, E V | + | [[Category: Fedorov, E V]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Raushel, F M | + | [[Category: Raushel, F M]] |
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Metallo peptidase]] | [[Category: Metallo peptidase]] | ||
| - | [[Category: New york sgx research center for structural genomic]] | ||
[[Category: Nysgrc]] | [[Category: Nysgrc]] | ||
| - | [[Category: | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
[[Category: Phosphinate inhibitor]] | [[Category: Phosphinate inhibitor]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Target 9523c]] | [[Category: Target 9523c]] | ||
Revision as of 13:09, 6 November 2014
Crystal structure of metallo peptidase from Rhodobacter sphaeroides liganded with phosphinate mimic of dipeptide L-Ala-D-Ala
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Categories: Rhodobacter sphaeroides | Almo, S C | Burley, S K | Cummings, J | Fedorov, A A | Fedorov, E V | Structural genomic | Raushel, F M | Hydrolase | Metallo peptidase | Nysgrc | NYSGXRC, New York SGX Research Center for Structural Genomics | Phosphinate inhibitor | PSI, Protein structure initiative | Target 9523c
