This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3gnl
From Proteopedia
(Difference between revisions)
m (Protected "3gnl" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b== | |
| - | + | <StructureSection load='3gnl' size='340' side='right' caption='[[3gnl]], [[Resolution|resolution]] 1.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3gnl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNL OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GNL FirstGlance]. <br> | |
| - | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LMOf2365_1472 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=265669 Listeria monocytogenes serotype 4b str. F2365])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gnl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gnl OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gnl RCSB], [http://www.ebi.ac.uk/pdbsum/3gnl PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gnl TOPSAN]</span></td></tr> | |
| - | == | + | </table> |
| - | [[3gnl]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes_serotype_4b_str._f2365 Listeria monocytogenes serotype 4b str. f2365]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GNL OCA]. | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gn/3gnl_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Listeria monocytogenes serotype 4b str. f2365]] | [[Category: Listeria monocytogenes serotype 4b str. f2365]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Structural genomic]] | [[Category: Structural genomic]] | ||
| + | [[Category: Ramagopal, U A]] | ||
| + | [[Category: Toro, R]] | ||
| + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
| + | [[Category: PSI, Protein structure initiative]] | ||
[[Category: Uncharacterized protein]] | [[Category: Uncharacterized protein]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 13:23, 6 November 2014
Structure of uncharacterized protein (LMOf2365_1472) from Listeria monocytogenes serotype 4b
| |||||||||||

