3dup
From Proteopedia
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| - | + | ==Crystal structure of mutt/nudix family hydrolase from rhodospirillum rubrum atcc 11170== | |
| - | + | <StructureSection load='3dup' size='340' side='right' caption='[[3dup]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3dup]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DUP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DUP FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Rru_A0214 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=269796 Rhodospirillum rubrum ATCC 11170])</td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dup FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dup OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dup RCSB], [http://www.ebi.ac.uk/pdbsum/3dup PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3dup TOPSAN]</span></td></tr> |
| - | [[3dup]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum_atcc_11170 Rhodospirillum rubrum atcc 11170]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DUP OCA]. | + | </table> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/du/3dup_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Rhodospirillum rubrum atcc 11170]] | [[Category: Rhodospirillum rubrum atcc 11170]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Burley, S K | + | [[Category: Burley, S K]] |
| - | [[Category: Chang, S | + | [[Category: Chang, S]] |
| - | [[Category: Freeman, J | + | [[Category: Freeman, J]] |
| - | [[Category: Groshong, C | + | [[Category: Groshong, C]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Patskovsky, Y | + | [[Category: Patskovsky, Y]] |
| - | [[Category: Ramagopal, U A | + | [[Category: Ramagopal, U A]] |
| - | [[Category: Sauder, J M | + | [[Category: Sauder, J M]] |
| - | [[Category: Toro, R | + | [[Category: Toro, R]] |
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Hydrolase 3 family]] | [[Category: Hydrolase 3 family]] | ||
| - | [[Category: New | + | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] |
| - | + | ||
[[Category: Nudix superfamily hydrolase]] | [[Category: Nudix superfamily hydrolase]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
Revision as of 13:48, 6 November 2014
Crystal structure of mutt/nudix family hydrolase from rhodospirillum rubrum atcc 11170
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Categories: Rhodospirillum rubrum atcc 11170 | Almo, S C | Burley, S K | Chang, S | Freeman, J | Groshong, C | Structural genomic | Patskovsky, Y | Ramagopal, U A | Sauder, J M | Toro, R | Hydrolase | Hydrolase 3 family | NYSGXRC, New York SGX Research Center for Structural Genomics | Nudix superfamily hydrolase | PSI, Protein structure initiative
