This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
ABC transporter
From Proteopedia
(Difference between revisions)
| Line 38: | Line 38: | ||
***[[3ipc]] – AtABC leucine transporter<br /> | ***[[3ipc]] – AtABC leucine transporter<br /> | ||
| - | + | **Lysine ABC transporter | |
| - | [[3k4u]] - ABC transporter + lysine – ''Wolinella succinogenes''<br /> | + | ***[[3k4u]] - ABC transporter + lysine – ''Wolinella succinogenes''<br /> |
| - | [[3i6v]] - SpABC amino acids transporter + lysine – ''Silicibacter pomeroyi''<br /> | + | ***[[3i6v]] - SpABC amino acids transporter + lysine – ''Silicibacter pomeroyi''<br /> |
| - | [[2pvu]] - GsABC amino acids transporter (mutant)+lysine<br /> | + | ***[[2pvu]] - GsABC amino acids transporter (mutant)+lysine<br /> |
| - | + | **Histidine ABC transporter | |
| - | [[2q2c]] - GsABC amino acids transporter (mutant)+histidine<br /> | + | ***[[2q2c]] - GsABC amino acids transporter (mutant)+histidine<br /> |
| - | + | **Methionine ABC transporter | |
| - | [[2qsw]] - EfABC methionine transporter C-terminal – ''Enterococcus faecalis''<br /> | + | ***[[2qsw]] - EfABC methionine transporter C-terminal – ''Enterococcus faecalis''<br /> |
| - | [[3ced]] - SaABC methionine transporter NIL domain - ''Staphylococcus aureus''<br /> | + | ***[[3ced]] - SaABC methionine transporter NIL domain - ''Staphylococcus aureus''<br /> |
| - | [[3tqw]] - CbABC methionine transporter + methionine <br /> | + | ***[[3tqw]] - CbABC methionine transporter + methionine <br /> |
| - | [[3dhw]] - EcABC methionine transporter<br /> | + | ***[[3dhw]] - EcABC methionine transporter<br /> |
| - | [[3dhx ]]- EcABC methionine transporter C2 domain<br /> | + | ***[[3dhx]]- EcABC methionine transporter C2 domain<br /> |
| - | [[2qrr]] - ABC methionine transporter soluble domain - ''Vibrio parahaemolyticus'' <br /> | + | ***[[2qrr]] - ABC methionine transporter soluble domain - ''Vibrio parahaemolyticus'' <br /> |
| - | + | **Alanine ABC transporter | |
| - | [[3ip5]], [[3ipa]] – AtABC alanine transporter – ''Agrobacterium tumefaciens''<br /> | + | ***[[3ip5]], [[3ipa]] – AtABC alanine transporter – ''Agrobacterium tumefaciens''<br /> |
| - | + | **Proline ABC transporter | |
| - | [[3ip6]] – AtABC proline transporter<br /> | + | ***[[3ip6]] – AtABC proline transporter<br /> |
| - | [[3tmg]] - BbABC proline transporter – ''Borrelia burgdorferi''<br / > | + | ***[[3tmg]] - BbABC proline transporter – ''Borrelia burgdorferi''<br / > |
| - | + | **Polar amino acid ABC transporter | |
| - | [[3hv1]] - ABC polar amino acids transporter SBD – ''Streptococcus thermophilus''<br /> | + | ***[[3hv1]] - ABC polar amino acids transporter SBD – ''Streptococcus thermophilus''<br /> |
| - | + | **Unspecified amino acid ABC transporter | |
| - | [[3c41]] - GsABC amino acids transporter +AMP-PNP <br /> | + | ***[[3c41]] - GsABC amino acids transporter +AMP-PNP <br /> |
| - | [[3c4j]] - GsABC amino acids transporter +ATPgS<br /> | + | ***[[3c4j]] - GsABC amino acids transporter +ATPgS<br /> |
| - | [[2olj]] - EcABC amino acid transporter+ADP/Mg – ''Escherichia coli''<br /> | + | ***[[2olj]] - EcABC amino acid transporter+ADP/Mg – ''Escherichia coli''<br /> |
| - | [[2olk]] - EcABC amino acid transporter+ADP-beta-S<br /> | + | ***[[2olk]] - EcABC amino acid transporter+ADP-beta-S<br /> |
| - | [[2ouk]] - EcABC amino acid transporter+sulfate<br /> | + | ***[[2ouk]] - EcABC amino acid transporter+sulfate<br /> |
| - | [[3o6p]] - EfABC amino acids transporter<br /> | + | ***[[3o6p]] - EfABC amino acids transporter<br /> |
| - | [[3ip9]] – AtABC amino acid transporter+GABA<br /> | + | ***[[3ip9]] – AtABC amino acid transporter+GABA<br /> |
| - | + | **Cationic amino acid ABC transporter | |
| - | [[2m8c]] - EcABC amino acids transporter<br /> | + | ***[[2m8c]] - EcABC amino acids transporter<br /> |
| - | + | **Oligopeptide ABC transporter | |
| - | [[3i5o]], [[1vr5]] - TmABC oligopeptides transporter <br /> | + | ***[[3i5o]], [[1vr5]] - TmABC oligopeptides transporter <br /> |
| - | [[4gl8]] - BbABC oligopeptide transporter + peptide<br /> | + | ***[[4gl8]] - BbABC oligopeptide transporter + peptide<br /> |
| - | [[4ikv]], [[4ikw]] - GkABC oligopeptides transporter – ''Geobacillus kaustophilus''<br /> | + | ***[[4ikv]], [[4ikw]] - GkABC oligopeptides transporter – ''Geobacillus kaustophilus''<br /> |
| - | [[4ikx]], [[4iky]] - GkABC oligopeptides transporter (mutant)<br /> | + | ***[[4ikx]], [[4iky]] - GkABC oligopeptides transporter (mutant)<br /> |
| - | [[ | + | ***[[4ikz]] - GkABC oligopeptides transporter (mutant) + alafosfalin<br /> |
| - | [[2d5w]] - TtABC oligopeptide transporter + peptide<br /> | + | ***[[2d5w]] - TtABC oligopeptide transporter + peptide<br /> |
| - | + | * ABC sugar transporters | |
| - | [[2vk2]] - EcABC galactofuranose transporter +galactofuranose<br /> | + | **[[2vk2]] - EcABC galactofuranose transporter +galactofuranose<br /> |
| - | [[2xz3]] – EcABC maltose trasnsporter + maltose<br /> | + | **[[2xz3]] – EcABC maltose trasnsporter + maltose<br /> |
| - | [[3puy]], [[3puz]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose + AMPPNP<br /> | + | **[[3puy]], [[3puz]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose + AMPPNP<br /> |
| - | [[3rlf]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose + AMPPNP<br /> | + | **[[3rlf]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose + AMPPNP<br /> |
| - | [[4khz]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP <br /> | + | **[[4khz]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP <br /> |
| - | [[4jbw]] - EcABC maltose trasnsporter MalK, MalF, MalG + EIIAGLC<br /> | + | **[[4jbw]] - EcABC maltose trasnsporter MalK, MalF, MalG + EIIAGLC<br /> |
| - | [[3pv0]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose <br /> | + | **[[3pv0]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose <br /> |
| - | [[2r6g]], [[3puv]], [[3puw]], [[3pux]], [[4ki0]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose + nucleotide<br /> | + | **[[2r6g]], [[3puv]], [[3puw]], [[3pux]], [[4ki0]] - EcABC maltose trasnsporter MalK, MalF, MalG, MBP + maltose + nucleotide<br /> |
| - | [[3fh6]] - EcABC maltose trasnsporter MalK, MalF, MalG <br /> | + | **[[3fh6]] - EcABC maltose trasnsporter MalK, MalF, MalG <br /> |
| - | [[3ob4]] - EcABC maltose transsporter AraH2 (mutant) + maltotriose<br /> | + | **[[3ob4]] - EcABC maltose transsporter AraH2 (mutant) + maltotriose<br /> |
| - | [[2w7y]] - SpABC sugar transporter+A-trisaccaride – ''Streptococcus pneumoniae''<br /> | + | **[[2w7y]] - SpABC sugar transporter+A-trisaccaride – ''Streptococcus pneumoniae''<br /> |
| - | [[2i58]] - SpABC sugar transporter+raffinose<br /> | + | **[[2i58]] - SpABC sugar transporter+raffinose<br /> |
| - | [[2hq0]], [[2heu]], [[2hfb]] - SpABC sugar transporter<br /> | + | **[[2hq0]], [[2heu]], [[2hfb]] - SpABC sugar transporter<br /> |
| - | [[3g1w]] - BhABC sugar transporter – ''Bacillus halodurans''<br /> | + | **[[3g1w]] - BhABC sugar transporter – ''Bacillus halodurans''<br /> |
| - | [[2z8d]] - BlABC lacto-N-biose transporter SBD+lacto-N-biose – ''Bifidobacterium longum''<br /> | + | **[[2z8d]] - BlABC lacto-N-biose transporter SBD+lacto-N-biose – ''Bifidobacterium longum''<br /> |
| - | [[2z8e]] - BlABC lacto-N-biose transporter SBD+galacto-N-biose<br /> | + | **[[2z8e]] - BlABC lacto-N-biose transporter SBD+galacto-N-biose<br /> |
| - | [[2z8f]] - BlABC lacto-N-biose transporter SBD+lacto-N-tetraose<br /> | + | **[[2z8f]] - BlABC lacto-N-biose transporter SBD+lacto-N-tetraose<br /> |
| - | [[3c6q]] - TmABC sugar transporter (mutant)+beta-xylopyranose<br /> | + | **[[3c6q]] - TmABC sugar transporter (mutant)+beta-xylopyranose<br /> |
| - | [[2yyz]], [[2qvc]], [[2h3h]], [[2hpg]], [[2ghb]] - TmABC sugar transporter<br /> | + | **[[2yyz]], [[2qvc]], [[2h3h]], [[2hpg]], [[2ghb]] - TmABC sugar transporter<br /> |
| - | [[2fn9]] - TmABC sugar transporter (mutant)<br /> | + | **[[2fn9]] - TmABC sugar transporter (mutant)<br /> |
| - | [[2o7i]] - TmABC sugar transporter+cellobiose<br /> | + | **[[2o7i]] - TmABC sugar transporter+cellobiose<br /> |
| - | [[2gha]] , [[2fnc]] - TmABC sugar transporter+maltotriose<br /> | + | **[[2gha]], [[2fnc]] - TmABC sugar transporter+maltotriose<br /> |
| - | [[2fn8]] - TmABC sugar transporter+ribose<br /> | + | **[[2fn8]] - TmABC sugar transporter+ribose<br /> |
| - | [[1vci]], [[1v43]] - PhABC sugar transporter – ''Pyrococcus horikoshii'' | + | **[[1vci]], [[1v43]] - PhABC sugar transporter – ''Pyrococcus horikoshii''<br /> |
| - | <br /> | + | **[[1oxx]], [[1oxs]], [[1oxt]], [[1oxu]], [[1oxv]] - ABC glucose transporter (mutant) – ''Sulfolobus solfataricus''<br /> |
| - | [[1oxx]], [[1oxs]], [[1oxt]], [[1oxu]], [[1oxv]] - ABC glucose transporter (mutant) – ''Sulfolobus solfataricus''<br /> | + | **[[3l49]] - ABC ribose transporter – ''Rhodobacter sphaeroides''<br /> |
| - | [[3l49]] - ABC ribose transporter – ''Rhodobacter sphaeroides''<br /> | + | |
| - | + | * ABC metal transporters | |
| - | + | ** ABC metal transporters | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ***[[3hh8]] - ABC metal transporter – ''Streptococcus pyogenes''<br /> | |
| - | + | ** ABC cobalt transporters | |
| - | + | ||
| - | + | ||
| - | + | ***[[3gfo]] - ABC cobalt transporter – ''Clostridium perfringens''<br /> | |
| - | + | ** ABC nickel transporters | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ***[[3t66]] - BhABC nickel transporter (mutant)<br /> | |
| - | + | ** ABC tungsten transporters | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ***[[3lr1]] - ABC tungstate transporter – ''Geobacter sulfurreducens''<br /> | |
| + | ***[[2onk]] - AfABC molybdate/tungstate transporter+Mo/W binding protein – ''Archaeoglobus fulgidus''<br /> | ||
| + | ***[[2onr]] - AfABC molybdate/tungstate transporter+Mo<br /> | ||
| + | ***[[2ons]] - AfABC molybdate/tungstate transporter+W<br /> | ||
| - | + | ** ABC iron transporters | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ***[[3lhs]], [[3li2]] - SaABC OpuAC ferrichrome transporter fragment+Staphyloferrin A <br /> | |
| + | ***[[3mwf]], [[3mwg]] - SaABC siderophore transporter +Staphyloferrin B<br /> | ||
| + | ***[[3g9q]], [[3hxp]] - BsABC ferrichrome transporter<br /> | ||
| + | ***[[3be5]], [[3be6]] - EcABC iron transporter <br /> | ||
| + | ***[[2etv]] - TmABC iron transporter <br /> | ||
| - | + | ** ABC molybden transporters | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ***[[3d31]] - MaABC sulfate/molybdate transporter – ''Methanosarcina acetivorans''<br /> | |
| + | ***[[3cfx]] - MaABC sulfate/molybdate transporter + WO4<br /> | ||
| + | ***[[3cfz]] - MjABC sulfate/molybdate transporter + WO4<br /> | ||
| + | ***[[3cg1]] - ABC sulfate/molybdate transporter + WO4 – ''Pyrococcus furiosus''<br /> | ||
| + | ***[[3cg3]] - PhABC sulfate/molybdate transporter + WO4<br /> | ||
| - | + | ** ABC zinc transporters | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ***[[2ogw]] - EcABC zinc transporter<br /> | |
| + | ***[[2xh8]] - SeABC zinc transporter (mutant) – ''Salmonella enterica''<br /> | ||
| + | ***[[2xqv]] - SeABC zinc transporter + Zn<br /> | ||
| + | ***[[2xy4]] - SeABC zinc transporter<br /> | ||
| + | ***[[2ov3]], [[2ov1]], [[1pq4]] - SsABC zinc transporter – ''Synechocystis''<br /> | ||
| - | [[3gd7]] – hCFTR/malK+N6-phenylethyl-ATP<br /> | + | * ABC multidrug transporters |
| - | [[2pze]], [[2pzf]], [[2pzg]] – hCFTR NBD1<br /> | + | |
| - | [[2bbo]], [[2bbs]], [[2bbt]] - hCFTR NBD1 (mutant)<br /> | + | **[[2onj]] - SaABC multidrug transporter+AMP-PNP<br /> |
| - | [[1xmi]], [[2xmj]], [[1xmj]] - hCFTR NBD1 (mutant)+ATP<br /> | + | **[[2hyd]] - SaABC multidrug transporter<br /> |
| - | [[1xf9]], [[2xfa]], [[1xfa]] - mCFTR NBD1 (mutant) - mouse<br /> | + | **[[1mv5]] - LlABC multidrug transporter ATP binding domain – ''Lactococcus lactis'' |
| - | [[1q3h]] - mCFTR NBD1+AMPPNP<br /> | + | |
| - | [[1r0w]] - mCFTR NBD1<br /> | + | * ABC choline transporters |
| - | [[1r0x]], [[1r0z]], [[1r10]] - mCFTR NBD1+ATP<br /> | + | |
| - | [[1r0y]] - mCFTR NBD1+ADP<br /> | + | **[[3hcq]] - SmABC choline transporter (mutant) – ''Sinorhizobium meliloti''<br /> |
| - | [[1ckw]], [[1ckx]], [[1cky]], [[1ckz]] – CFTR F508 region - NMR | + | **[[2rin]] - SmABC choline transporter (mutant)+acetylcholine<br /> |
| + | **[[2reg]] - SmABC choline transporter (mutant)+choline<br /> | ||
| + | **[[2rej]], [[2rf1]] - SmABC choline transporter (mutant)<br /> | ||
| + | **[[3o66]] – SaABC choline transporter | ||
| + | |||
| + | * ABC alpha-hemolysin transporters | ||
| + | |||
| + | **[[2pmk]] - EcABC alpha-hemolysin transporter+TNP-ADP<br /> | ||
| + | **[[2ff7]] - EcABC alpha-hemolysin transporter+ADP<br /> | ||
| + | **[[2ffa]], [[2ffb]] - EcABC alpha-hemolysin transporter (mutant)+ADP<br /> | ||
| + | **[[2fgj]], [[2fgk]], [[2xef]] - EcABC alpha-hemolysin transporter (mutant)+ATP<br /> | ||
| + | **[[3b5j]] - EcABC alpha-hemolysin transporter (mutant)+TNP-ADP<br /> | ||
| + | |||
| + | * ABC various compounds transporters | ||
| + | |||
| + | **[[2v84]] - ABC spermidine/putrescine transporter – ''Treponema pallidum''<br /> | ||
| + | **[[2qi9]] - EcABC vitamin B12 transporter+BtuD+BtuF<br /> | ||
| + | **[[1l7v]] - EcABC vitamin B12 transporter+BtuD<br /> | ||
| + | **[[3p7i]], [[3qk6]], [[3quj]], [[3s4u]] – EcABC alkylphosphonate transporter PHND + aminoethyl phosphonic acid<br /> | ||
| + | **[[1twy]] - ABC phosphate transporter – ''Vibrio cholerae''<br /> | ||
| + | **[[3l6g]], [[3l6h]] – LlABC OpuAC betaine transporter SBD <br /> | ||
| + | **[[2zzv]] - TtABC solute transporter+lactate+Ca<br /> | ||
| + | **[[2zzw]] - TtABC solute transporter+lactate+Zn<br /> | ||
| + | **[[2zzx]] - TtABC solute transporter+lactate<br /> | ||
| + | **[[3gfv]] - BsABC petrobactin transporter – ''Bacillus subtilis''<br /> | ||
| + | **[[3bk7]] – ABC ATP-binding – ''Pyrococcus abyssi''<br /> | ||
| + | **[[3ppn]] - BsABC multiple solute transporter<br /> | ||
| + | **[[3ppo]], [[3ppp]], [[3ppq]], [[3ppr]] - BsABC multiple solute transporter + solute<br /> | ||
| + | **[[3hn0]] – ABC NO3 transporter – ''Parabacteroides distasonis''<br /> | ||
| + | **[[3rlb]] - LlABC vitamin B1 transporter + thiamin<br /> | ||
| + | **[[4dve]] - LlABC biotin transporter + biotin | ||
| + | |||
| + | *hABC transporters subfamilies | ||
| + | |||
| + | **[[3nh6]] – hABCB6 NBD<br /> | ||
| + | **[[3nhb]] – hABCB6 NBD+ADP<br /> | ||
| + | **[[3nh9]] – hABCB6 NBD+ATP<br /> | ||
| + | **[[3nha]] – hABCB6 NBD+ATP+Mg | ||
| + | |||
| + | * ABC unspecified transporters | ||
| + | |||
| + | **[[3lvu]] - SpABC transporter SBD <br /> | ||
| + | **[[2ihy]] - SaABC transporter ATPase subunit <br /> | ||
| + | **[[3eaf]] - ABC transporter SBD – ''Aeropyrum pernix''<br /> | ||
| + | **[[3c9h]] - AtABC transporter – ''Agrobacterium tumefaciens''<br /> | ||
| + | **[[1vpl]], [[1ji0]] - TmABC transporter <br /> | ||
| + | **[[2pcj]], [[2pcl]] - ABC transporter – ''Aquifex aeolicus''<br /> | ||
| + | **[[3rpw]] - ABC transporter – ''Rhodopseudomonas palustris''<br /> | ||
| + | **[[2yl4]] - hABC transporter 10<br /> | ||
| + | **[[4g68]] – ABC transporter - ''Caldanaerobius'' | ||
| + | |||
| + | * Cystic fibrosis transmembrane conductance regulator (CFTR) | ||
| + | |||
| + | **[[3gd7]] – hCFTR/malK+N6-phenylethyl-ATP<br /> | ||
| + | **[[2pze]], [[2pzf]], [[2pzg]] – hCFTR NBD1<br /> | ||
| + | **[[2bbo]], [[2bbs]], [[2bbt]] - hCFTR NBD1 (mutant)<br /> | ||
| + | **[[1xmi]], [[2xmj]], [[1xmj]] - hCFTR NBD1 (mutant)+ATP<br /> | ||
| + | **[[1xf9]], [[2xfa]], [[1xfa]] - mCFTR NBD1 (mutant) - mouse<br /> | ||
| + | **[[1q3h]] - mCFTR NBD1+AMPPNP<br /> | ||
| + | **[[1r0w]] - mCFTR NBD1<br /> | ||
| + | **[[1r0x]], [[1r0z]], [[1r10]] - mCFTR NBD1+ATP<br /> | ||
| + | **[[1r0y]] - mCFTR NBD1+ADP<br /> | ||
| + | **[[1ckw]], [[1ckx]], [[1cky]], [[1ckz]] – CFTR F508 region - NMR | ||
}} | }} | ||
Revision as of 13:56, 11 November 2014
| |||||||||||
3D Structures of ABC transporter
Updated on 11-November-2014
References
- ↑ 1.0 1.1 Huls et al. The Role of ATP Binding Cassette Transporters in Tissue Defense and Organ Regeneration. Journal of Pharmacology and Experimental Therapeutics, 2008; 328 (1)
- ↑ 2.0 2.1 2.2 Garrett R, Grisham CM. Biochemistry. 2008. 1059 pages
- ↑ 3.0 3.1 Linton KJ, Higgins CF. The Escherichia coli ATP-binding cassette (ABC) proteins. Mol Microbiol 28: 5–13, 1998
- ↑ 4.0 4.1 4.2 Linton KJ. Structure and Function of ABC Transporters. Physiology 22: 122-130, 2007; doi:10.1152/physiol.00046.2006
- ↑ 5.0 5.1 Borths EL. Structural and biochemical characterization of the vitamin B12 ABC transporter, BtuCD-F. Dissertation (Ph.D.), California Institute of Technology. 2005
Proteopedia Page Contributors and Editors (what is this?)
Michal Harel, Alexander Berchansky, Joel L. Sussman, Zina Saadi

