1kok
From Proteopedia
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- | [[Image:1kok.gif|left|200px]] | + | [[Image:1kok.gif|left|200px]] |
- | + | ||
- | '''Crystal Structure of Mesopone Cytochrome c Peroxidase (MpCcP)''' | + | {{Structure |
+ | |PDB= 1kok |SIZE=350|CAPTION= <scene name='initialview01'>1kok</scene>, resolution 1.70Å | ||
+ | |SITE= | ||
+ | |LIGAND= <scene name='pdbligand=HIF:FE(III)-(4-MESOPORPHYRINONE)'>HIF</scene> | ||
+ | |ACTIVITY= [http://en.wikipedia.org/wiki/Cytochrome-c_peroxidase Cytochrome-c peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.5 1.11.1.5] | ||
+ | |GENE= OPBYC ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 Saccharomyces cerevisiae]) | ||
+ | }} | ||
+ | |||
+ | '''Crystal Structure of Mesopone Cytochrome c Peroxidase (MpCcP)''' | ||
+ | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
- | 1KOK is a [ | + | 1KOK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1KOK OCA]. |
==Reference== | ==Reference== | ||
- | Mesopone cytochrome c peroxidase: functional model of heme oxygenated oxidases., Immoos CE, Bhaskar B, Cohen MS, Barrows TP, Farmer PJ, Poulos TL, J Inorg Biochem. 2002 Sep 20;91(4):635-43. PMID:[http:// | + | Mesopone cytochrome c peroxidase: functional model of heme oxygenated oxidases., Immoos CE, Bhaskar B, Cohen MS, Barrows TP, Farmer PJ, Poulos TL, J Inorg Biochem. 2002 Sep 20;91(4):635-43. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12237229 12237229] |
[[Category: Cytochrome-c peroxidase]] | [[Category: Cytochrome-c peroxidase]] | ||
[[Category: Saccharomyces cerevisiae]] | [[Category: Saccharomyces cerevisiae]] | ||
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[[Category: trp191 cationic radical]] | [[Category: trp191 cationic radical]] | ||
- | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 12:20:08 2008'' |
Revision as of 10:20, 20 March 2008
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, resolution 1.70Å | |||||||
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Ligands: | |||||||
Gene: | OPBYC (Saccharomyces cerevisiae) | ||||||
Activity: | Cytochrome-c peroxidase, with EC number 1.11.1.5 | ||||||
Coordinates: | save as pdb, mmCIF, xml |
Crystal Structure of Mesopone Cytochrome c Peroxidase (MpCcP)
Overview
The effect of heme ring oxygenation on enzyme structure and function has been examined in a reconstituted cytochrome c peroxidase. Oxochlorin derivatives were formed by OsO(4) treatment of mesoporphyrin followed by acid-catalyzed pinacol rearrangement. The northern oxochlorin isomers were isolated by chromatography, and the regio-isomers assignments determined by 2D COSY and NOE 1H NMR. The major isomer, 4-mesoporphyrinone (Mp), was metallated with FeCl(2) and reconstituted into cytochrome c peroxidase (CcP) forming a hybrid green protein, MpCcP. The heme-altered enzyme has 99% wild-type peroxidase activity with cytochrome c. EPR spectroscopy of MpCcP intermediate compound I verifies the formation of the Trp(191) radical similar to wild-type CcP in the reaction cycle. Peroxidase activity with small molecules is varied: guaiacol turnover increases approximately five-fold while that with ferrocyanide is approximately 85% of native. The electron-withdrawing oxo-substitutents on the cofactor cause a approximately 60-mV increase in Fe(III)/Fe(II) reduction potential. The present investigation represents the first structural characterization of an oxochlorin protein with X-ray intensity data collected to 1.70 A. Although a mixture of R- and S-mesopone isomers of the FeMP cofactor was used during heme incorporation into the apo-protein, only the S-isomer is found in the crystallized protein.
About this Structure
1KOK is a Single protein structure of sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA.
Reference
Mesopone cytochrome c peroxidase: functional model of heme oxygenated oxidases., Immoos CE, Bhaskar B, Cohen MS, Barrows TP, Farmer PJ, Poulos TL, J Inorg Biochem. 2002 Sep 20;91(4):635-43. PMID:12237229
Page seeded by OCA on Thu Mar 20 12:20:08 2008
Categories: Cytochrome-c peroxidase | Saccharomyces cerevisiae | Single protein | Barrows, T P. | Bhaskar, B. | Cohen, M S. | Farmer, P J. | Immoos, C E. | Poulos, T L. | HIF | Bifunctional catalyst | Cytochrome c peroxidase | Cytochrome oxidase | Mesoporphyrin | Nitrite reducatse | Proximal loop | Trp191 cationic radical