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Beta-glucosidase

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{{#tree:id=OrganizedByTopic|openlevels=0|
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===Beta-glucosidase===
+
*Beta-glucosidase
-
[[3ahx]] – GBA – ''Clostridium cellulovorans''<br />
+
**[[3ahx]] – GBA – ''Clostridium cellulovorans''<br />
-
[[3ahy]] – TrGB – ''Trichoderma reesei''<br />
+
**[[3ahy]] – TrGB – ''Trichoderma reesei''<br />
-
[[3abz]] – KmGB – ''Kluyveromyces marxianus''<br />
+
**[[3abz]] – KmGB – ''Kluyveromyces marxianus''<br />
-
[[2x40]] – TnGB3B – ''Thermotoga neapolitana''<br />
+
**[[2x40]] – TnGB3B – ''Thermotoga neapolitana''<br />
-
[[3gno]] - JrGB residues 38-521 – Japanese rice<br />
+
**[[3gno]] - JrGB residues 38-521 – Japanese rice<br />
-
[[2rgl]], [[2rgm]] - JrGB residues 29-504<br />
+
**[[2rgl]], [[2rgm]] - JrGB residues 29-504<br />
-
[[3f4v]], [[3f5j]], [[3f5k]], [[3f5l]],[[3scn]], [[3sco]], [[3sct]], [[3scu]], [[3scv]], [[3scw]], [[3scp]], [[3scr]] - JrGB7 (mutant) <br />
+
**[[3f4v]], [[3f5j]], [[3f5k]], [[3f5l]],[[3scn]], [[3sco]], [[3sct]], [[3scu]], [[3scv]], [[3scw]], [[3scp]], [[3scr]] - JrGB7 (mutant) <br />
-
[[3ahz]] – tGB – termite<br />
+
**[[3ahz]] – tGB – termite<br />
-
[[3fiy]], [[3cmj]] - UbGB catalytic domain (mutant) – Uncultured bacteria<br />
+
**[[3fiy]], [[3cmj]] - UbGB catalytic domain (mutant) – Uncultured bacteria<br />
-
[[2o9p]], [[1bga]] – PpGBB – ''Paenibacillus polymyxa''<br />
+
**[[2o9p]], [[1bga]] – PpGBB – ''Paenibacillus polymyxa''<br />
-
[[2jfe]], [[3gxd]], [[3gxi]], [[3gxm]] - hGB cystolic – human<br />
+
**[[2jfe]], [[3gxd]], [[3gxi]], [[3gxm]] - hGB cystolic – human<br />
-
[[3ke0]], [[3keh]] - hGB (mutant)<br />
+
**[[3ke0]], [[3keh]] - hGB (mutant)<br />
-
[[2e3z]] – PcGB – ''Phanerochaete crysosporium''<br />
+
**[[2e3z]] – PcGB – ''Phanerochaete crysosporium''<br />
-
[[2dga]] - wGB residues 1-520 – wheat<br />
+
**[[2dga]] - wGB residues 1-520 – wheat<br />
-
[[2vff]], [[1vff]] – GB – ''Pyrococcus horikoshii''<br />
+
**[[2vff]], [[1vff]] – GB – ''Pyrococcus horikoshii''<br />
-
[[1oif]], [[1od0]] – TmGB catalytic domain - ''Thermotoga maritima''<br />
+
**[[1oif]], [[1od0]] – TmGB catalytic domain - ''Thermotoga maritima''<br />
-
[[4gxp]] – TmGB/TrGB<br />
+
**[[4gxp]] – TmGB/TrGB<br />
-
[[1ug6]] – GB - ''Thermus thermophilus''<br />
+
**[[1ug6]] – GB - ''Thermus thermophilus''<br />
-
[[1hxj]], [[1e1e]] – ZmGB – ''Zea mays''<br />
+
**[[1hxj]], [[1e1e]] – ZmGB – ''Zea mays''<br />
-
[[1e4l]] - ZmGB (mutant) <br />
+
**[[1e4l]] - ZmGB (mutant) <br />
-
[[1gon]] – SsGB – ''Streptomyces sp.'' <br />
+
**[[1gon]] – SsGB – ''Streptomyces sp.'' <br />
-
[[1qox]] – GB - ''Bacillus circulans''<br />
+
**[[1qox]] – GB - ''Bacillus circulans''<br />
-
[[1tr1]] - BpGBB (mutant) - ''Bacillus polymyxa''<br />
+
**[[1tr1]] - BpGBB (mutant) - ''Bacillus polymyxa''<br />
-
[[1cbg]] – GB cyanogenic – White clover<br />
+
**[[1cbg]] – GB cyanogenic – White clover<br />
-
[[3aiu]] - rGB residues 50-568 – rye<br />
+
**[[3aiu]] - rGB residues 50-568 – rye<br />
-
[[3f93]], [[3f94]] – PsGB residues 28-840 – ''Pseudoalteromonas''<br />
+
**[[3f93]], [[3f94]] – PsGB residues 28-840 – ''Pseudoalteromonas''<br />
-
[[3f95]] – PsGB residues 657-840<br />
+
**[[3f95]] – PsGB residues 657-840<br />
-
[[3ptk]] – rGB - rice<br />
+
**[[3ptk]] – rGB - rice<br />
-
[[3apg]] – GB – ''Pyrococcus furiosus''<br />
+
**[[3apg]] – GB – ''Pyrococcus furiosus''<br />
-
[[3ta9]] – GB – ''Halothermothrix orenii''<br />
+
**[[3ta9]] – GB – ''Halothermothrix orenii''<br />
-
[[3zyz]], [[3zz1]] – GB – ''Hypocrea jecorina''<br />
+
**[[3zyz]], [[3zz1]] – GB – ''Hypocrea jecorina''<br />
-
[[4hz6]] – ubGB – uncultured bacterium<br />
+
**[[4hz6]] – ubGB – uncultured bacterium<br />
-
[[4bce]] – GB (mutant) – ''Thermus thermophilus''<br />
+
**[[4bce]] – GB (mutant) – ''Thermus thermophilus''<br />
-
[[4iib]] – AaGB – ''Aspergillus aculeatus''<br />
+
**[[4iib]] – AaGB – ''Aspergillus aculeatus''<br />
-
[[3w53]] – GB – ''Micrococcus antarcticus''<br />
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**[[3w53]] – GB – ''Micrococcus antarcticus''<br />
-
===Beta-glucosidase complex with sugar===
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*Beta-glucosidase complex with sugar
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[[3ptm]], [[3ptq]] – rGB + glucoside<br />
+
**[[3ptm]], [[3ptq]] – rGB + glucoside<br />
-
[[3wba]], [[3wbe]] – rGB (mutant) + glucose<br />
+
**[[3wba]], [[3wbe]] – rGB (mutant) + glucose<br />
-
[[3ai0]] – tGB + glucoside<br />
+
**[[3ai0]] – tGB + glucoside<br />
-
[[3ac0]] - KmGB + glucoside<br />
+
**[[3ac0]] - KmGB + glucoside<br />
-
[[2x41]], [[2x42]] - TnGB + glucoside<br />
+
**[[2x41]], [[2x42]] - TnGB + glucoside<br />
-
[[3air]] – wGB residues 50-569 + glucoside + dinitrophenol<br />
+
**[[3air]] – wGB residues 50-569 + glucoside + dinitrophenol<br />
-
[[3ais]] - wGB residues 50-569 (mutant) + glucoside + aglycone<br />
+
**[[3ais]] - wGB residues 50-569 (mutant) + glucoside + aglycone<br />
-
[[3aiq]] - wGB residues 50-569 + aglycone<br />
+
**[[3aiq]] - wGB residues 50-569 + aglycone<br />
-
[[3aiv]] - rGB residues 50-568 + aglycone<br />
+
**[[3aiv]] - rGB residues 50-568 + aglycone<br />
-
[[3aiw]] - rGB residues 50-568 + glucoside + dinitrophenol<br />
+
**[[3aiw]] - rGB residues 50-568 + glucoside + dinitrophenol<br />
-
[[3gnp]], [[3gnr]] - JrGB residues 38-521 + glucoside<br />
+
**[[3gnp]], [[3gnr]] - JrGB residues 38-521 + glucoside<br />
-
[[3aht]], [[3ahv]], [[3scq]], [[3scs]] – JrGB7 (mutant) + saccharide<br />
+
**[[3aht]], [[3ahv]], [[3scq]], [[3scs]] – JrGB7 (mutant) + saccharide<br />
-
[[1oin]] - TmGBA + glucoside<br />
+
**[[1oin]] - TmGBA + glucoside<br />
-
[[3fiz]], [[3fj0]] - UbGB residues 18-482 (mutant) + glucoside<br />
+
**[[3fiz]], [[3fj0]] - UbGB residues 18-482 (mutant) + glucoside<br />
-
[[2zox]], [[2e9l]], [[2e9m]] - hGB cystolic + glucoside<br />
+
**[[2zox]], [[2e9l]], [[2e9m]] - hGB cystolic + glucoside<br />
-
[[2o9s]], [[2o9r]], [[2z1s]] – PpGB + saccharide<br />
+
**[[2o9s]], [[2o9r]], [[2z1s]] – PpGB + saccharide<br />
-
[[2o9t]] - PpGB + glucoside<br />
+
**[[2o9t]] - PpGB + glucoside<br />
-
[[1uyq]] - PpGB (mutant) + glucoside<br />
+
**[[1uyq]] - PpGB (mutant) + glucoside<br />
-
[[1bgg]] - PpGB + gluconate<br />
+
**[[1bgg]] - PpGB + gluconate<br />
-
[[2jie]] - BpGB + glucoside<br />
+
**[[2jie]] - BpGB + glucoside<br />
-
[[1e4i]] - BpGB (mutant) + glucoside<br />
+
**[[1e4i]] - BpGB (mutant) + glucoside<br />
-
[[2e40]] – PcGB + gluconolactone<br />
+
**[[2e40]] – PcGB + gluconolactone<br />
-
[[3vif]] - NkGB + gluconolactone – ''Neotermes koshunensis''<br />
+
**[[3vif]] - NkGB + gluconolactone – ''Neotermes koshunensis''<br />
-
[[3vig]], [[3vii]] - NkGB + saccharide<br />
+
**[[3vig]], [[3vii]] - NkGB + saccharide<br />
-
[[3vih]] – NkGB + glycerol<br />
+
**[[3vih]] – NkGB + glycerol<br />
-
[[3vij]] – NkGB (mutant) + glucose<br />
+
**[[3vij]] – NkGB (mutant) + glucose<br />
-
[[3vik]], [[3vil]], [[3vim]], [[3vin]], [[3vio]], [[3vip]] – NkGB (mutant) + saccharide<br />
+
**[[3vik]], [[3vil]], [[3vim]], [[3vin]], [[3vio]], [[3vip]] – NkGB (mutant) + saccharide<br />
-
[[4hz7]], [[4hz8]] - ubGB (mutant) + glucose<br />
+
**[[4hz7]], [[4hz8]] - ubGB (mutant) + glucose<br />
-
[[1v08]] – ZmGB + gluco-tetrazole<br />
+
**[[1v08]] – ZmGB + gluco-tetrazole<br />
-
[[1e1f]] - ZmGB + glucoside<br />
+
**[[1e1f]] - ZmGB + glucoside<br />
-
[[1h49]], [[1e4n]], [[1e56]] - ZmGB (mutant) + aglycone<br />
+
**[[1h49]], [[1e4n]], [[1e56]] - ZmGB (mutant) + aglycone<br />
-
[[1gnx]] - SsGB + saccharide - ''Sulfolobus solfataricus''<br />
+
**[[1gnx]] - SsGB + saccharide - ''Sulfolobus solfataricus''<br />
-
[[3gfx]] – hGB + drug<br />
+
**[[3gfx]] – hGB + drug<br />
-
[[4iic]], [[4iid]], [[4iie]], [[4iif]] – AaGB + drug<br />
+
**[[4iic]], [[4iid]], [[4iie]], [[4iif]] – AaGB + drug<br />
-
[[4iig]], [[4iih]] – AaGB + saccharide<br />
+
**[[4iig]], [[4iih]] – AaGB + saccharide<br />
-
[[3vkk]] – hGB + mannose<br />
+
**[[3vkk]] – hGB + mannose<br />
-
[[4i3g]] – GB + glucose – ''Streptomyces venezuelae''<br />
+
**[[4i3g]] – GB + glucose – ''Streptomyces venezuelae''<br />
-
===Beta-glucosidase complex with inhibitor===
+
*Beta-glucosidase complex with inhibitor
-
[[2wbg]], [[2wc3]], [[2wc4]], [[2vrj]], [[2jal]], [[2j75]], [[2j77]], [[2j78]], [[2j79]], [[2j7b]], [[2j7d]], [[2j7e]], [[2j7f]], [[2j7g]], [[2j7h]], [[2j7c]], [[2ces]], [[2cet]], [[2cbu]], [[2cbv]], [[1uz1]], [[1w3j]], [[1oim]] – TmGBA + inhibitor<br />
+
**[[2wbg]], [[2wc3]], [[2wc4]], [[2vrj]], [[2jal]], [[2j75]], [[2j77]], [[2j78]], [[2j79]], [[2j7b]], [[2j7d]], [[2j7e]], [[2j7f]], [[2j7g]], [[2j7h]], [[2j7c]], [[2ces]], [[2cet]], [[2cbu]], [[2cbv]], [[1uz1]], [[1w3j]], [[1oim]] – TmGBA + inhibitor<br />
-
[[2cer]] – SsGB + inhibitor <br />
+
**[[2cer]] – SsGB + inhibitor <br />
-
[[1e55]] - ZmGB (mutant) + inhibitor<br />
+
**[[1e55]] - ZmGB (mutant) + inhibitor<br />
-
[[3rik]], [[3ril]] - hGB + inhibitor
+
**[[3rik]], [[3ril]] - hGB + inhibitor
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===6-phospho-β-glucosidase===
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*6-phospho-β-glucosidase
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[[1s6y]] – PGB – ''Geobacillus stearothermophilus''<br />
+
**[[1s6y]] – PGB – ''Geobacillus stearothermophilus''<br />
-
[[1up4]] – TmPGB <br />
+
**[[1up4]] – TmPGB <br />
-
[[1up6]], [[1up7]] – TmPGB + NAD + G6P<br />
+
**[[1up6]], [[1up7]] – TmPGB + NAD + G6P<br />
-
[[3qom]], [[4gze]] – PGB – ''Lactobacillus plantarum''<br />
+
**[[3qom]], [[4gze]] – PGB – ''Lactobacillus plantarum''<br />
-
[[2xhy]] – PGB – ''Escherichia coli''<br />
+
**[[2xhy]] – PGB – ''Escherichia coli''<br />
-
[[1h4p]] – PGB I/II – yeast<br />
+
**[[1h4p]] – PGB I/II – yeast<br />
-
[[3eqn]] – WfPGB – White-rot fungus<br />
+
**[[3eqn]] – WfPGB – White-rot fungus<br />
-
[[3eqo]] – WfPGB + glucolactone<br />
+
**[[3eqo]] – WfPGB + glucolactone<br />
-
[[4b3k]], [[4b3l]] – GB – ''Streptococcus pyogenes''<br />
+
**[[4b3k]], [[4b3l]] – GB – ''Streptococcus pyogenes''<br />
-
[[4gpn]] – GB + gentiobiose 6-phosphate – ''Streptococcus mutans''<br />
+
**[[4gpn]] – GB + gentiobiose 6-phosphate – ''Streptococcus mutans''<br />
-
[[4ipl]] – SpGB – ''Streptococcus pneumoniae''<br />
+
**[[4ipl]] – SpGB – ''Streptococcus pneumoniae''<br />
-
[[4ipn]] – SpGB + thiocellobiose<br />
+
**[[4ipn]] – SpGB + thiocellobiose<br />
-
===Glucan 1,3-β-glucosidase===
+
*Glucan 1,3-β-glucosidase
-
[[3n9k]] – CaGGB + glucoside – ''Candida albicans''<br />
+
**[[3n9k]] – CaGGB + glucoside – ''Candida albicans''<br />
-
[[3o6a]] – CaGGB (mutant)<br />
+
**[[3o6a]] – CaGGB (mutant)<br />
-
[[3ur7]], [[3ur8]] – poGGB – potato<br />
+
**[[4gzi]] – poGGB (mutant)<br />
-
[[4gzi]] – poGGB (mutant)<br />
+
**[[4gzj]] - poGGB (mutant) + saccharide
-
[[4gzj]] - poGGB (mutant) + saccharide
+
-
===Raucaffricine-β-glucosidase===
+
*Raucaffricine-β-glucosidase
-
[[3u57]], [[3u5u]] – dpRGB (mutant) – devilpepper<br />
+
**[[3u57]], [[3u5u]] – dpRGB (mutant) – devilpepper<br />
-
[[3u5y]] – dpRGB (mutant)m + secologanin<br />
+
**[[3u5y]] – dpRGB (mutant)m + secologanin<br />
-
[[4a3y]], [[4atd]] – seRGB - serpentwood<br />
+
**[[4a3y]], [[4atd]] – seRGB - serpentwood<br />
-
[[4atl]] – seRGB + glucose<br />
+
**[[4atl]] – seRGB + glucose<br />
-
[[4ek7]] – seRGB (mutant)<br />
+
**[[4ek7]] – seRGB (mutant)<br />
-
[[3zj6]] – seRGB + inhibitor<br />
+
**[[3zj6]] – seRGB + inhibitor<br />
-
===Strictosidine-β-glucosidase===
+
*Strictosidine-β-glucosidase
-
 
+
-
[[3zj7]], [[3zj8]] – seSGB + inhibitor<br />
+
 +
**[[3zj7]], [[3zj8]] – seSGB + inhibitor<br />
 +
}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Revision as of 11:59, 18 November 2014

β-glucosidase complex with calystegine analog, acetate and Ca+2 ion (green) (PDB code 2vrj)

Drag the structure with the mouse to rotate

3D structures of Beta-glucosidase

Updated on 18-November-2014

References

  1. ↑ Aguilar M, Gloster TM, Garcia-Moreno MI, Ortiz Mellet C, Davies GJ, Llebaria A, Casas J, Egido-Gabas M, Garcia Fernandez JM. Molecular basis for beta-glucosidase inhibition by ring-modified calystegine analogues. Chembiochem. 2008 Nov 3;9(16):2612-8. PMID:18833549 doi:10.1002/cbic.200800451
  2. ↑ http://en.wikipedia.org/wiki/B-glucosidase
  3. ↑ Davies G, Henrissat B. Structures and mechanisms of glycosyl hydrolases. Structure. 1995 Sep 15;3(9):853-9. PMID:8535779
  4. ↑ http://www.ebi.ac.uk/interpro/IEntry?ac=IPR018120#PUB00002205
  5. ↑ http://www.ebi.ac.uk/thornton-srv/databases/cgi-bin/CSA/CSA_Site_Wrapper.pl?pdb=2vrj
  6. ↑ Davies G, Henrissat B. Structures and mechanisms of glycosyl hydrolases. Structure. 1995 Sep 15;3(9):853-9. PMID:8535779
  7. ↑ http://www.cazy.org/fam/ghf_INV_RET.html#3
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