Blaise Arden/Sandbox 1
From Proteopedia
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== Relevance == | == Relevance == | ||
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| + | ===Rhodopsin (Rn)=== | ||
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| + | [[3aym]], [[3ayn]], [[2z73]], [[2ziy]] – Rn + detergents + retinal – Flying squid<br /> | ||
| + | [[3am6]] – Rn-2 + cholesterol + retinal – ''Acetabularia acetabulum''<br /> | ||
| + | [[2x72]] – bRn + detergents + retinal + guanine nucleotide-binding protein peptide – bovine<br /> | ||
| + | [[3qc9]] – bRn + Mg + ADP<br /> | ||
| + | [[3oax]], [[3c9l]], [[2ped]], [[2i35]], [[2i36]], [[2i37]], [[1u19]], [[1gzm]], [[1l9h]], [[1hzx]] - bRn + detergents + retinal<br /> | ||
| + | [[3cap]] - bovine Rn + detergents<br /> | ||
| + | [[1jfp]], [[1f88]] - bRn + retinal<br /> | ||
| + | [[3c9m]] - bRn (mutant) + detergents + retinal<br /> | ||
| + | [[2j4y]], [[4bez]] - bRn (mutant) + detergents<br /> | ||
| + | [[3dqb]], [[4a4m]], [[4j4q]] - bRn + guanine nucleotide-binding protein peptide + detergents<br /> | ||
| + | [[4bey]] - bRn (mutant) + guanine nucleotide-binding protein peptide + detergents<br /> | ||
| + | [[1vqx]], [[1nzs]] – bRn C terminal – NMR<BR /> | ||
| + | [[1edx]] - bRn N terminal – NMR<BR /> | ||
| + | [[1eds]], [[1edv]], [[1edw]] – bRn intradiskal loop – NMR<BR /> | ||
| + | [[1fdf]] – bRn helix 7 - NMR<BR /> | ||
| + | [[1xio]] – Rn - ''Anabaena''<br /> | ||
| + | [[4hyj]] - Rn + retinal + lipid – ''Exiguobacterium Sibiricum''<br /> | ||
| + | [[1gu8]], [[1gue]], [[1h68]], [[1jgj]], [[3qap]], [[3qdc]] – NpRn II – ''Natronomonas pharaonis''<br /> | ||
| + | [[2ksy]] – NpRn II - NMR<br /> | ||
| + | [[1h2s]], [[2f93]], [[2f95]] – NpRn II + Rn II transducer<br /> | ||
| + | [[4gyc]] - NpRn II (mutant) + Rn II transducer<br /> | ||
== Structural highlights == | == Structural highlights == | ||
Revision as of 17:54, 19 November 2014
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References
- ↑ Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
- ↑ Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644
