1ln4
From Proteopedia
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| - | [[Image:1ln4.jpg|left|200px]] | + | [[Image:1ln4.jpg|left|200px]] |
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| - | '''CRYSTAL STRUCTURE OF E. COLI YHBY''' | + | {{Structure |
| + | |PDB= 1ln4 |SIZE=350|CAPTION= <scene name='initialview01'>1ln4</scene>, resolution 1.5Å | ||
| + | |SITE= | ||
| + | |LIGAND= | ||
| + | |ACTIVITY= | ||
| + | |GENE= YHBY ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
| + | }} | ||
| + | |||
| + | '''CRYSTAL STRUCTURE OF E. COLI YHBY''' | ||
| + | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1LN4 is a [ | + | 1LN4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LN4 OCA]. |
==Reference== | ==Reference== | ||
| - | Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins., Ostheimer GJ, Barkan A, Matthews BW, Structure. 2002 Nov;10(11):1593-601. PMID:[http:// | + | Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins., Ostheimer GJ, Barkan A, Matthews BW, Structure. 2002 Nov;10(11):1593-601. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12429100 12429100] |
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
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[[Category: putative rna-binding protein; putative translation factor]] | [[Category: putative rna-binding protein; putative translation factor]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 12:32:49 2008'' |
Revision as of 10:32, 20 March 2008
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| , resolution 1.5Å | |||||||
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| Gene: | YHBY (Escherichia coli) | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
CRYSTAL STRUCTURE OF E. COLI YHBY
Overview
E. coli YhbY belongs to a conserved family of hypothetical proteins represented in eubacteria, archaea, and plants (Pfam code UPF0044). Three maize proteins harboring UPF0044-like domains are required for chloroplast group II intron splicing, and bioinformatic data suggest a role for prokaryotic UPF0044 members in translation. The crystal structure of YhbY has been determined. YhbY has a fold similar to that of the C-terminal domain of translation initiation factor 3 (IF3C), which binds to 16S rRNA in the 30S ribosome. Modeling studies indicate that the same surface is highly basic in all members of UPF0044, suggesting a conserved RNA binding surface. Taken together, the evidence suggests that members of UPF0044 constitute a previously unrecognized class of RNA binding domain.
About this Structure
1LN4 is a Single protein structure of sequence from Escherichia coli. Full crystallographic information is available from OCA.
Reference
Crystal structure of E. coli YhbY: a representative of a novel class of RNA binding proteins., Ostheimer GJ, Barkan A, Matthews BW, Structure. 2002 Nov;10(11):1593-601. PMID:12429100
Page seeded by OCA on Thu Mar 20 12:32:49 2008
