This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3fb8
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | + | ==KcsA Potassium channel in the open-conductive state with 20 A opening at T112 in the presence of Rb+ ion== | |
| - | + | <StructureSection load='3fb8' size='340' side='right' caption='[[3fb8]], [[Resolution|resolution]] 3.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3fb8]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Streptomyces_lividans Streptomyces lividans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FB8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FB8 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=RB:RUBIDIUM+ION'>RB</scene></td></tr> | |
| - | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3f5w|3f5w]], [[3f7v|3f7v]], [[3f7y|3f7y]], [[3fb5|3fb5]], [[3fb6|3fb6]], [[3fb7|3fb7]]</td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">kcsA, skc1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1916 Streptomyces lividans])</td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fb8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fb8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fb8 RCSB], [http://www.ebi.ac.uk/pdbsum/3fb8 PDBsum]</span></td></tr> |
| - | [[3fb8]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Streptomyces_lividans Streptomyces lividans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FB8 OCA]. | + | </table> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fb/3fb8_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Antibody|Antibody]] | *[[Antibody|Antibody]] | ||
*[[Potassium Channel|Potassium Channel]] | *[[Potassium Channel|Potassium Channel]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Mus musculus]] | [[Category: Mus musculus]] | ||
[[Category: Streptomyces lividans]] | [[Category: Streptomyces lividans]] | ||
| - | [[Category: Cortes, D M | + | [[Category: Cortes, D M]] |
| - | [[Category: Cuello, L G | + | [[Category: Cuello, L G]] |
| - | [[Category: Jogini, V | + | [[Category: Jogini, V]] |
| - | [[Category: Perozo, E | + | [[Category: Perozo, E]] |
[[Category: Cell membrane]] | [[Category: Cell membrane]] | ||
[[Category: Inactivation]] | [[Category: Inactivation]] | ||
Revision as of 08:35, 26 November 2014
KcsA Potassium channel in the open-conductive state with 20 A opening at T112 in the presence of Rb+ ion
| |||||||||||
Categories: Mus musculus | Streptomyces lividans | Cortes, D M | Cuello, L G | Jogini, V | Perozo, E | Cell membrane | Inactivation | Ion transport | Ionic channel | Kcsa | Membrane | Membrane protein-metal transport complex | Open | Potassium channel | Transmembrane | Transport | Voltage-gated channel

