This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3f01

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3f01" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3f01.png|left|200px]]
+
==Crystal Structure of Synaptotagmin I C2A domain with Cu(II)==
-
 
+
<StructureSection load='3f01' size='340' side='right' caption='[[3f01]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
{{STRUCTURE_3f01| PDB=3f01 | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3f01]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F01 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3F01 FirstGlance]. <br>
-
===Crystal Structure of Synaptotagmin I C2A domain with Cu(II)===
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CU:COPPER+(II)+ION'>CU</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
 
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3f00|3f00]], [[3f04|3f04]], [[3f05|3f05]]</td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SYT1, SVP65, SYT ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3f01 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f01 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3f01 RCSB], [http://www.ebi.ac.uk/pdbsum/3f01 PDBsum]</span></td></tr>
-
[[3f01]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F01 OCA].
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/3f01_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Dakshinamurthy, R.]]
+
[[Category: Dakshinamurthy, R]]
-
[[Category: Guo, F.]]
+
[[Category: Guo, F]]
-
[[Category: Sakon, J.]]
+
[[Category: Sakon, J]]
-
[[Category: Thallapuranam, S K.K.]]
+
[[Category: Thallapuranam, S K.K]]
[[Category: C2a]]
[[Category: C2a]]
[[Category: Cell junction]]
[[Category: Cell junction]]

Revision as of 08:58, 26 November 2014

Crystal Structure of Synaptotagmin I C2A domain with Cu(II)

3f01, resolution 1.70Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools