1mfz
From Proteopedia
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| - | [[Image:1mfz.gif|left|200px]] | + | [[Image:1mfz.gif|left|200px]] |
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| - | '''Partially refined 2.8 A Crystal structure of GDP-mannose dehydrogenase from P. aeruginosa''' | + | {{Structure |
| + | |PDB= 1mfz |SIZE=350|CAPTION= <scene name='initialview01'>1mfz</scene>, resolution 2.8Å | ||
| + | |SITE= | ||
| + | |LIGAND= <scene name='pdbligand=GDX:GUANOSINE 5'-(TRIHYDROGEN DIPHOSPHATE), P'-D-MANNOPYRANOSYL ESTER'>GDX</scene> | ||
| + | |ACTIVITY= [http://en.wikipedia.org/wiki/GDP-mannose_6-dehydrogenase GDP-mannose 6-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.132 1.1.1.132] | ||
| + | |GENE= AlgD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa]) | ||
| + | }} | ||
| + | |||
| + | '''Partially refined 2.8 A Crystal structure of GDP-mannose dehydrogenase from P. aeruginosa''' | ||
| + | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1MFZ is a [ | + | 1MFZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1MFZ OCA]. |
==Reference== | ==Reference== | ||
| - | Crystal structure of GDP-mannose dehydrogenase: a key enzyme of alginate biosynthesis in P. aeruginosa., Snook CF, Tipton PA, Beamer LJ, Biochemistry. 2003 Apr 29;42(16):4658-68. PMID:[http:// | + | Crystal structure of GDP-mannose dehydrogenase: a key enzyme of alginate biosynthesis in P. aeruginosa., Snook CF, Tipton PA, Beamer LJ, Biochemistry. 2003 Apr 29;42(16):4658-68. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12705829 12705829] |
[[Category: GDP-mannose 6-dehydrogenase]] | [[Category: GDP-mannose 6-dehydrogenase]] | ||
[[Category: Pseudomonas aeruginosa]] | [[Category: Pseudomonas aeruginosa]] | ||
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[[Category: rossman fold]] | [[Category: rossman fold]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 12:43:07 2008'' |
Revision as of 10:43, 20 March 2008
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| , resolution 2.8Å | |||||||
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| Ligands: | |||||||
| Gene: | AlgD (Pseudomonas aeruginosa) | ||||||
| Activity: | GDP-mannose 6-dehydrogenase, with EC number 1.1.1.132 | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Partially refined 2.8 A Crystal structure of GDP-mannose dehydrogenase from P. aeruginosa
Overview
The enzyme GMD from Pseudomonas aeruginosa catalyzes the committed step in the synthesis of the exopolysaccharide alginate. Alginate is a major component of P. aeruginosa biofilms that protect the bacteria from the host immune response and antibiotic therapy. The 1.55 A crystal structure of GMD in ternary complex with its cofactor NAD(H) and product GDP-mannuronic acid reveals that the enzyme forms a domain-swapped dimer with two polypeptide chains contributing to each active site. The extensive dimer interface provides multiple opportunities for intersubunit communication. Comparison of the GMD structure with that of UDP-glucose dehydrogenase reveals the structural basis of sugar binding specificity that distinguishes these two related enzyme families. The high-resolution structure of GMD provides detailed information on the active site of the enzyme and a template for structure-based inhibitor design.
About this Structure
1MFZ is a Single protein structure of sequence from Pseudomonas aeruginosa. Full crystallographic information is available from OCA.
Reference
Crystal structure of GDP-mannose dehydrogenase: a key enzyme of alginate biosynthesis in P. aeruginosa., Snook CF, Tipton PA, Beamer LJ, Biochemistry. 2003 Apr 29;42(16):4658-68. PMID:12705829
Page seeded by OCA on Thu Mar 20 12:43:07 2008
