3fwz
From Proteopedia
(Difference between revisions)
m (Protected "3fwz" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli== | |
| - | + | <StructureSection load='3fwz' size='340' side='right' caption='[[3fwz]], [[Resolution|resolution]] 1.79Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3fwz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FWZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b0478, Escherichia coli CFT073, JW0467, ybaL, ylaA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 Escherichia coli K-12])</td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fwz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fwz RCSB], [http://www.ebi.ac.uk/pdbsum/3fwz PDBsum], [http://www.topsan.org/Proteins/MCSG/3fwz TOPSAN]</span></td></tr> |
| - | [[3fwz]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k-12 Escherichia coli k-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWZ OCA]. | + | </table> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwz_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Escherichia coli k-12]] | [[Category: Escherichia coli k-12]] | ||
| - | [[Category: Bigelow, L | + | [[Category: Bigelow, L]] |
| - | [[Category: Buck, K | + | [[Category: Buck, K]] |
| - | [[Category: Chang, C | + | [[Category: Chang, C]] |
| - | [[Category: Joachimiak, A | + | [[Category: Joachimiak, A]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
[[Category: Antiport]] | [[Category: Antiport]] | ||
[[Category: Cell inner membrane]] | [[Category: Cell inner membrane]] | ||
| Line 22: | Line 34: | ||
[[Category: Membrane]] | [[Category: Membrane]] | ||
[[Category: Membrane protein]] | [[Category: Membrane protein]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Transmembrane]] | [[Category: Transmembrane]] | ||
[[Category: Transport]] | [[Category: Transport]] | ||
[[Category: Trka-n domain]] | [[Category: Trka-n domain]] | ||
[[Category: Ybal]] | [[Category: Ybal]] | ||
Revision as of 10:23, 3 December 2014
Crystal structure of TrkA-N domain of inner membrane protein ybaL from Escherichia coli
| |||||||||||
Categories: Escherichia coli k-12 | Bigelow, L | Buck, K | Chang, C | Joachimiak, A | Structural genomic | Antiport | Cell inner membrane | Cell membrane | E coli | Ion transport | Mcsg | Membrane | Membrane protein | PSI, Protein structure initiative | Transmembrane | Transport | Trka-n domain | Ybal
