3fyn
From Proteopedia
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| - | + | ==Crystal structure from the mobile metagenome of Cole Harbour Salt Marsh: Integron Cassette Protein HFX_CASS3== | |
| - | + | <StructureSection load='3fyn' size='340' side='right' caption='[[3fyn]], [[Resolution|resolution]] 1.45Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3fyn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FYN FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ORF1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=77133 uncultured bacterium])</td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fyn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fyn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fyn RCSB], [http://www.ebi.ac.uk/pdbsum/3fyn PDBsum], [http://www.topsan.org/Proteins/MCSG/3fyn TOPSAN]</span></td></tr> |
| - | [[3fyn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Uncultured_bacterium Uncultured bacterium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FYN OCA]. | + | </table> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fy/3fyn_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Uncultured bacterium]] | [[Category: Uncultured bacterium]] | ||
| - | [[Category: Curmi, P M.G | + | [[Category: Curmi, P M.G]] |
| - | [[Category: Deshpande, C N | + | [[Category: Deshpande, C N]] |
| - | [[Category: Doolittle, W F | + | [[Category: Doolittle, W F]] |
| - | [[Category: Edwards, A M | + | [[Category: Edwards, A M]] |
| - | [[Category: Evdokimova, E | + | [[Category: Evdokimova, E]] |
| - | [[Category: Harrop, S J | + | [[Category: Harrop, S J]] |
| - | [[Category: Joachimiak, A | + | [[Category: Joachimiak, A]] |
| - | [[Category: Koenig, J E | + | [[Category: Koenig, J E]] |
| - | [[Category: Kudritska, M | + | [[Category: Kudritska, M]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Mabbutt, B C | + | [[Category: Mabbutt, B C]] |
| - | [[Category: Osipiuk, J | + | [[Category: Osipiuk, J]] |
| - | [[Category: Savchenko, A | + | [[Category: Savchenko, A]] |
| - | [[Category: Stokes, H W | + | [[Category: Stokes, H W]] |
| - | [[Category: Sureshan, V | + | [[Category: Sureshan, V]] |
[[Category: Integron cassette protein]] | [[Category: Integron cassette protein]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: Midwest center for structural genomic]] | ||
[[Category: Mobile metagenome]] | [[Category: Mobile metagenome]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 10:24, 3 December 2014
Crystal structure from the mobile metagenome of Cole Harbour Salt Marsh: Integron Cassette Protein HFX_CASS3
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Categories: Uncultured bacterium | Curmi, P M.G | Deshpande, C N | Doolittle, W F | Edwards, A M | Evdokimova, E | Harrop, S J | Joachimiak, A | Koenig, J E | Kudritska, M | Structural genomic | Mabbutt, B C | Osipiuk, J | Savchenko, A | Stokes, H W | Sureshan, V | Integron cassette protein | Mcsg | Mobile metagenome | PSI, Protein structure initiative | Unknown function
