This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fk2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3fk2" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3fk2.png|left|200px]]
+
==Crystal structure of the RhoGAP domain of human glucocorticoid receptor DNA-binding factor 1==
-
 
+
<StructureSection load='3fk2' size='340' side='right' caption='[[3fk2]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
{{STRUCTURE_3fk2| PDB=3fk2 | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3fk2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FK2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FK2 FirstGlance]. <br>
-
===Crystal structure of the RhoGAP domain of human glucocorticoid receptor DNA-binding factor 1===
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GRLF1, GRF1, KIAA1722 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fk2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fk2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fk2 RCSB], [http://www.ebi.ac.uk/pdbsum/3fk2 PDBsum]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[3fk2]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FK2 OCA].
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fk2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith, C H]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Bochkarev, A]]
-
[[Category: Bountra, C.]]
+
[[Category: Bountra, C]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards, A M]]
-
[[Category: Loppnau, P.]]
+
[[Category: Loppnau, P]]
-
[[Category: Nedyalkova, L.]]
+
[[Category: Nedyalkova, L]]
-
[[Category: Park, H.]]
+
[[Category: Park, H]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Structural genomic]]
-
[[Category: Tempel, W.]]
+
[[Category: Tempel, W]]
-
[[Category: Tong, Y.]]
+
[[Category: Tong, Y]]
-
[[Category: Weigelt, J.]]
+
[[Category: Weigelt, J]]
[[Category: Anti-oncogene]]
[[Category: Anti-oncogene]]
[[Category: Cell cycle]]
[[Category: Cell cycle]]
Line 31: Line 42:
[[Category: Sgc]]
[[Category: Sgc]]
[[Category: Signaling protein]]
[[Category: Signaling protein]]
-
[[Category: Structural genomics consortium]]
 
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulation]]

Revision as of 10:29, 3 December 2014

Crystal structure of the RhoGAP domain of human glucocorticoid receptor DNA-binding factor 1

3fk2, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools