This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3fkk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3fkk" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:3fkk.png|left|200px]]
+
==Structure of L-2-keto-3-deoxyarabonate dehydratase==
-
 
+
<StructureSection load='3fkk' size='340' side='right' caption='[[3fkk]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
{{STRUCTURE_3fkk| PDB=3fkk | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[3fkk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azospirillum_brasilense Azospirillum brasilense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FKK FirstGlance]. <br>
-
===Structure of L-2-keto-3-deoxyarabonate dehydratase===
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
-
 
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3fkr|3fkr]]</td></tr>
-
 
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AraD ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=192 Azospirillum brasilense])</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fkk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fkk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fkk RCSB], [http://www.ebi.ac.uk/pdbsum/3fkk PDBsum]</span></td></tr>
-
[[3fkk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Azospirillum_brasilense Azospirillum brasilense]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FKK OCA].
+
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/3fkk_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Azospirillum brasilense]]
[[Category: Azospirillum brasilense]]
-
[[Category: Mikami, B.]]
+
[[Category: Mikami, B]]
-
[[Category: Shimada, N.]]
+
[[Category: Shimada, N]]
[[Category: Dhdps/nal family]]
[[Category: Dhdps/nal family]]
[[Category: Lyase]]
[[Category: Lyase]]

Revision as of 10:30, 3 December 2014

Structure of L-2-keto-3-deoxyarabonate dehydratase

3fkk, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools