3gfh

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[[Image:3gfh.png|left|200px]]
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==Crystal structure of EUTL shell protein of the bacterial ethanolamine micrompartment==
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<StructureSection load='3gfh' size='340' side='right' caption='[[3gfh]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3gfh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GFH FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3cgi|3cgi]], [[3bn4|3bn4]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">b2439, EUT-L, eutL, JW2432, yffJ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gfh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gfh OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gfh RCSB], [http://www.ebi.ac.uk/pdbsum/3gfh PDBsum]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gf/3gfh_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Bacterial microcompartments (BMCs) are specialized organelles that use proteinaceous membranes to confine chemical reaction spaces. The ethanolamine ammonialyase microcompartment of Escherichia coli represents such a class of cytosolic organelles that enables bacteria to survive on small organic molecules such as ethanolamine as the sole source for carbon and nitrogen. We present here the crystal structure of the shell protein EutL at 2.2-A resolution. With 219 residues, it is the largest representative of this BMC's shell proteins. In the crystal, EutL forms a trimer that exhibits a hexagonally shaped tile structure. The tiles arrange into a tightly packed 2D array that is likely to resemble the proteinaceous membrane of the intact BMC. In contrast to other BMC shell proteins, which have only 1 pore per tile, EutL exhibits 3 pores per tile, thereby significantly increasing the overall porosity of this protein membrane. Each of the individual pores is lined with negatively charged residues and aromatic residues that are proposed to facilitate passive transport of specific solutes. The characteristic shape of the hexagonal tile, which is also found in the microcompartments of carbon-fixating bacteria, may present an inherent and fundamental building unit that may provide a general explanation for the formation of differently sized microcompartments.
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{{STRUCTURE_3gfh| PDB=3gfh | SCENE= }}
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Crystal structure of the EutL shell protein of the ethanolamine ammonia lyase microcompartment.,Sagermann M, Ohtaki A, Nikolakakis K Proc Natl Acad Sci U S A. 2009 Jun 2;106(22):8883-7. Epub 2009 May 18. PMID:19451619<ref>PMID:19451619</ref>
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===Crystal structure of EUTL shell protein of the bacterial ethanolamine micrompartment===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_19451619}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[3gfh]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GFH OCA].
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</StructureSection>
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==Reference==
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<ref group="xtra">PMID:019451619</ref><references group="xtra"/>
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[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Nikolakakis, K.]]
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[[Category: Nikolakakis, K]]
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[[Category: Ohtaki, A.]]
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[[Category: Ohtaki, A]]
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[[Category: Sagermann, M.]]
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[[Category: Sagermann, M]]
[[Category: Bacterial mircocompartment]]
[[Category: Bacterial mircocompartment]]
[[Category: Ethanolamine]]
[[Category: Ethanolamine]]
[[Category: Shell protein]]
[[Category: Shell protein]]
[[Category: Structural protein]]
[[Category: Structural protein]]

Revision as of 08:56, 8 December 2014

Crystal structure of EUTL shell protein of the bacterial ethanolamine micrompartment

3gfh, resolution 2.20Å

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