3gyu

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[[Image:3gyu.png|left|200px]]
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==Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7==
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<StructureSection load='3gyu' size='340' side='right' caption='[[3gyu]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3gyu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Strongyloides_stercoralis Strongyloides stercoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GYU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GYU FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DL7:(5BETA,14BETA,17ALPHA,25R)-3-OXOCHOLEST-7-EN-26-OIC+ACID'>DL7</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3gyt|3gyt]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">daf-12 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6248 Strongyloides stercoralis])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gyu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gyu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gyu RCSB], [http://www.ebi.ac.uk/pdbsum/3gyu PDBsum]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gy/3gyu_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Nematode parasitism is a worldwide health problem resulting in malnutrition and morbidity in over 1 billion people. The molecular mechanisms governing infection are poorly understood. Here, we report that an evolutionarily conserved nuclear hormone receptor signaling pathway governs development of the stage 3 infective larvae (iL3) in several nematode parasites, including Strongyloides stercoralis, Ancylostoma spp., and Necator americanus. As in the free-living Caenorhabditis elegans, steroid hormone-like dafachronic acids induced recovery of the dauer-like iL3 in parasitic nematodes by activating orthologs of the nuclear receptor DAF-12. Moreover, administration of dafachronic acid markedly reduced the pathogenic iL3 population in S. stercoralis, indicating the potential use of DAF-12 ligands to treat disseminated strongyloidiasis. To understand the pharmacology of targeting DAF-12, we solved the 3-dimensional structure of the S. stercoralis DAF-12 ligand-binding domain cocrystallized with dafachronic acids. These results reveal the molecular basis for DAF-12 ligand binding and identify nuclear receptors as unique therapeutic targets in parasitic nematodes.
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{{STRUCTURE_3gyu| PDB=3gyu | SCENE= }}
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Identification of the nuclear receptor DAF-12 as a therapeutic target in parasitic nematodes.,Wang Z, Zhou XE, Motola DL, Gao X, Suino-Powell K, Conneely A, Ogata C, Sharma KK, Auchus RJ, Lok JB, Hawdon JM, Kliewer SA, Xu HE, Mangelsdorf DJ Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9138-43. Epub 2009 Jun 2. PMID:19497877<ref>PMID:19497877</ref>
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===Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_19497877}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[3gyu]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Strongyloides_stercoralis Strongyloides stercoralis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GYU OCA].
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</StructureSection>
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==Reference==
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<ref group="xtra">PMID:019497877</ref><references group="xtra"/>
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[[Category: Strongyloides stercoralis]]
[[Category: Strongyloides stercoralis]]
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[[Category: Auchus, R J.]]
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[[Category: Auchus, R J]]
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[[Category: Conneely, A.]]
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[[Category: Conneely, A]]
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[[Category: Kliewer, S A.]]
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[[Category: Kliewer, S A]]
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[[Category: Mangelsdorf, D J.]]
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[[Category: Mangelsdorf, D J]]
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[[Category: Motola, D L.]]
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[[Category: Motola, D L]]
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[[Category: Ogata, C.]]
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[[Category: Ogata, C]]
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[[Category: Sharma, K K.]]
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[[Category: Sharma, K K]]
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[[Category: Suino-Powell, K.]]
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[[Category: Suino-Powell, K]]
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[[Category: Wang, Z.]]
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[[Category: Wang, Z]]
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[[Category: Xu, H E.]]
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[[Category: Xu, H E]]
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[[Category: Zhou, X E.]]
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[[Category: Zhou, X E]]
[[Category: Dafachronic acid]]
[[Category: Dafachronic acid]]
[[Category: Dna-binding]]
[[Category: Dna-binding]]

Revision as of 09:09, 8 December 2014

Nuclear receptor DAF-12 from parasitic nematode Strongyloides stercoralis in complex with its physiological ligand dafachronic acid delta 7

3gyu, resolution 2.40Å

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