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3izb

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[[Image:3izb.png|left|200px]]
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==Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome==
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<StructureSection load='3izb' size='340' side='right' caption='[[3izb]], [[Resolution|resolution]] 8.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3izb]] is a 29 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IZB OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3IZB FirstGlance]. <br>
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=UNK:UNKNOWN'>UNK</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3iz5|3iz5]], [[3iz6|3iz6]], [[3iz7|3iz7]], [[3iz9|3iz9]], [[3izs|3izs]], [[3izd|3izd]], [[3ize|3ize]], [[3izf|3izf]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3izb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3izb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3izb RCSB], [http://www.ebi.ac.uk/pdbsum/3izb PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Protein biosynthesis, the translation of the genetic code into polypeptides, occurs on ribonucleoprotein particles called ribosomes. Although X-ray structures of bacterial ribosomes are available, high-resolution structures of eukaryotic 80S ribosomes are lacking. Using cryoelectron microscopy and single-particle reconstruction, we have determined the structure of a translating plant (Triticum aestivum) 80S ribosome at 5.5-A resolution. This map, together with a 6.1-A map of a Saccharomyces cerevisiae 80S ribosome, has enabled us to model approximately 98% of the rRNA. Accurate assignment of the rRNA expansion segments (ES) and variable regions has revealed unique ES-ES and r-protein-ES interactions, providing insight into the structure and evolution of the eukaryotic ribosome.
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{{STRUCTURE_3izb| PDB=3izb | SCENE= }}
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Cryo-EM structure and rRNA model of a translating eukaryotic 80S ribosome at 5.5-A resolution.,Armache JP, Jarasch A, Anger AM, Villa E, Becker T, Bhushan S, Jossinet F, Habeck M, Dindar G, Franckenberg S, Marquez V, Mielke T, Thomm M, Berninghausen O, Beatrix B, Soding J, Westhof E, Wilson DN, Beckmann R Proc Natl Acad Sci U S A. 2010 Nov 16;107(46):19748-53. Epub 2010 Oct 27. PMID:20980660<ref>PMID:20980660</ref>
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===Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_20980660}}
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==About this Structure==
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[[3izb]] is a 29 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IZB OCA].
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==See Also==
==See Also==
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*[[Ribosomal protein S10|Ribosomal protein S10]]
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*[[Ribosome 3D structures|Ribosome 3D structures]]
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*[[Ribosomal protein S11|Ribosomal protein S11]]
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== References ==
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*[[Ribosomal protein S12|Ribosomal protein S12]]
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<references/>
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*[[Ribosomal protein S13|Ribosomal protein S13]]
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__TOC__
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*[[Ribosomal protein S14|Ribosomal protein S14]]
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</StructureSection>
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*[[Ribosomal protein S15|Ribosomal protein S15]]
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*[[Ribosomal protein S16|Ribosomal protein S16]]
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*[[Ribosomal protein S17|Ribosomal protein S17]]
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*[[Ribosomal protein S18|Ribosomal protein S18]]
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*[[Ribosomal protein S19|Ribosomal protein S19]]
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*[[Ribosomal protein S2|Ribosomal protein S2]]
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*[[Ribosomal protein S20|Ribosomal protein S20]]
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*[[Ribosomal protein S23|Ribosomal protein S23]]
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*[[Ribosomal protein S24|Ribosomal protein S24]]
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*[[Ribosomal protein S27|Ribosomal protein S27]]
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*[[Ribosomal protein S28|Ribosomal protein S28]]
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*[[Ribosomal protein S29|Ribosomal protein S29]]
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*[[Ribosomal protein S3|Ribosomal protein S3]]
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*[[Ribosomal protein S4|Ribosomal protein S4]]
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*[[Ribosomal protein S5|Ribosomal protein S5]]
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*[[Ribosomal protein S7|Ribosomal protein S7]]
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*[[Ribosomal protein S8|Ribosomal protein S8]]
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*[[Ribosomal protein S9|Ribosomal protein S9]]
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==Reference==
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<ref group="xtra">PMID:020980660</ref><ref group="xtra">PMID:020974910</ref><references group="xtra"/>
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[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
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[[Category: Anger, A M.]]
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[[Category: Anger, A M]]
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[[Category: Armache, J P.]]
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[[Category: Armache, J P]]
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[[Category: Beatrix, B.]]
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[[Category: Beatrix, B]]
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[[Category: Becker, T.]]
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[[Category: Becker, T]]
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[[Category: Beckmann, R.]]
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[[Category: Beckmann, R]]
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[[Category: Berninghausen, O.]]
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[[Category: Berninghausen, O]]
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[[Category: Bhushan, S.]]
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[[Category: Bhushan, S]]
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[[Category: Dindar, G.]]
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[[Category: Dindar, G]]
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[[Category: Franckenberg, S.]]
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[[Category: Franckenberg, S]]
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[[Category: Habeck, M.]]
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[[Category: Habeck, M]]
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[[Category: Jarasch, A.]]
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[[Category: Jarasch, A]]
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[[Category: Jossinet, F.]]
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[[Category: Jossinet, F]]
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[[Category: Marquez, V.]]
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[[Category: Marquez, V]]
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[[Category: Mielke, T.]]
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[[Category: Mielke, T]]
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[[Category: Soeding, J.]]
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[[Category: Soeding, J]]
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[[Category: Thomm, M.]]
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[[Category: Thomm, M]]
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[[Category: Villa, E.]]
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[[Category: Villa, E]]
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[[Category: Westhof, E.]]
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[[Category: Westhof, E]]
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[[Category: Wilson, D N.]]
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[[Category: Wilson, D N]]
[[Category: De novo modeling]]
[[Category: De novo modeling]]
[[Category: Eukaryotic ribosome]]
[[Category: Eukaryotic ribosome]]

Revision as of 09:22, 8 December 2014

Localization of the small subunit ribosomal proteins into a 6.1 A cryo-EM map of Saccharomyces cerevisiae translating 80S ribosome

3izb, resolution 8.80Å

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