This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3hcz
From Proteopedia
(Difference between revisions)
m (Protected "3hcz" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==The crystal structure of a domain of possible thiol-disulfide isomerase from Cytophaga hutchinsonii ATCC 33406.== | |
| - | + | <StructureSection load='3hcz' size='340' side='right' caption='[[3hcz]], [[Resolution|resolution]] 1.88Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3hcz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cytophaga_hutchinsonii Cytophaga hutchinsonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HCZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3HCZ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CHU_0134, Cytophaga hutchinsonii ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=985 Cytophaga hutchinsonii])</td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3hcz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hcz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3hcz RCSB], [http://www.ebi.ac.uk/pdbsum/3hcz PDBsum], [http://www.topsan.org/Proteins/MCSG/3hcz TOPSAN]</span></td></tr> |
| - | [[3hcz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cytophaga_hutchinsonii Cytophaga hutchinsonii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HCZ OCA]. | + | </table> |
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hc/3hcz_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Cytophaga hutchinsonii]] | [[Category: Cytophaga hutchinsonii]] | ||
| - | [[Category: Cobb, G | + | [[Category: Cobb, G]] |
| - | [[Category: Joachimiak, A | + | [[Category: Joachimiak, A]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Marshall, N | + | [[Category: Marshall, N]] |
| - | [[Category: Tan, K | + | [[Category: Tan, K]] |
[[Category: Apc61559 2]] | [[Category: Apc61559 2]] | ||
[[Category: Cytophaga hutchinsonii atcc]] | [[Category: Cytophaga hutchinsonii atcc]] | ||
[[Category: Isomerase]] | [[Category: Isomerase]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Thiol-disulfide isomerase]] | [[Category: Thiol-disulfide isomerase]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 09:30, 8 December 2014
The crystal structure of a domain of possible thiol-disulfide isomerase from Cytophaga hutchinsonii ATCC 33406.
| |||||||||||

