Ribonuclease

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Line 60: Line 60:
**[[2pqx]], [[2pqy]] - EcRNase I
 - ''Escherichia coli''<br />
**[[2pqx]], [[2pqy]] - EcRNase I
 - ''Escherichia coli''<br />
**[[2z70]], [[2ea1]] - EcRNase I + DNA<BR />

**[[2z70]], [[2ea1]] - EcRNase I + DNA<BR />

-
**[[3tsr]] – mRNase I + inhibitor<br />
+
**[[3tsr]] – mRNase I + inhibitor
*

 RNase II
*

 RNase II
Line 94: Line 94:
**[[1wdy]] - hRNase 4
<br />
**[[1wdy]] - hRNase 4
<br />
**[[2rnf]], [[1rnf]] - hRNase 4 + nucleotide<br />

**[[2rnf]], [[1rnf]] - hRNase 4 + nucleotide<br />

-
**[[1kvz]] - BuRNase 4 - NMR<BR />


+
**[[1kvz]] - BuRNase 4 - NMR
*RNase 5
*RNase 5
Line 118: Line 118:
*RNase 7
*RNase 7
-
**[[2hky]] - hRNase 7 - NMR<BR />


+
**[[2hky]] - hRNase 7 - NMR
*RNase A
*RNase A
Line 128: Line 128:
**[[4kxh]] – hRNase A<br />
**[[4kxh]] – hRNase A<br />
**[[2e33]] – bRNase A + F-box only protein 2<br />
**[[2e33]] – bRNase A + F-box only protein 2<br />
-
**[[4l55]] – bRNase A + aziru<br />
+
**[[4l55]] – bRNase A + aziru
*RNase B
*RNase B
Line 156: Line 156:
**[[1smx]], [[1sn8]] - EcRNase E S1 domain 
<br />
**[[1smx]], [[1sn8]] - EcRNase E S1 domain 
<br />
**[[2vrt]], [[2c0b]] - EcRNase E catalytic domain + RNA<br />
**[[2vrt]], [[2c0b]] - EcRNase E catalytic domain + RNA<br />
-
**[[3h8a]] – EcRNase E recognition domain + enolase<br />
+
**[[3h8a]] – EcRNase E recognition domain + enolase
*RNase F1
*RNase F1
**[[1fus]], [[1fut]] – GfRNase F1 + nucleotide – ''Gibberella fujikuroi''<br />
**[[1fus]], [[1fut]] – GfRNase F1 + nucleotide – ''Gibberella fujikuroi''<br />
-
**[[1rck]], [[1rcl]] - GfRNase F1 - NMR<BR />
+
**[[1rck]], [[1rcl]] - GfRNase F1 - NMR
*RNase H
*RNase H
Line 178: Line 178:
**[[4htu]], [[4hue]], [[4huf]], [[4hug]] - BhRNase H (mutant) + DNA<br />
**[[4htu]], [[4hue]], [[4huf]], [[4hug]] - BhRNase H (mutant) + DNA<br />
**[[4ibn]] – uRNase H – uncultured<br />
**[[4ibn]] – uRNase H – uncultured<br />
-
**[[4h8k]] – uRNase H + RNA + DNA<br />
+
**[[4h8k]] – uRNase H + RNA + DNA
*RNase HI
*RNase HI
Line 193: Line 193:
**[[1qhk]] - yRNase HI N-terminal – NMR<BR />
**[[1qhk]] - yRNase HI N-terminal – NMR<BR />
**[[3u3g]] – RNase HI – uncultured organism<br />
**[[3u3g]] – RNase HI – uncultured organism<br />
-
**[[4e19]], [[4nyn]] – RNase HI – ''Halobacterium salinarium''<br />
+
**[[4e19]], [[4nyn]] – RNase HI – ''Halobacterium salinarium''
*RNase HII
*RNase HII
Line 206: Line 206:
**[[1x1p]], [[1io2]] - TkRNase HII
<br />
**[[1x1p]], [[1io2]] - TkRNase HII
<br />
**[[2dfe]], [[2dff]], [[2dfh]] - TkRNase HII (mutant) - ''Thermococcus kodakarensis
''<br />
**[[2dfe]], [[2dff]], [[2dfh]] - TkRNase HII (mutant) - ''Thermococcus kodakarensis
''<br />
-
**[[1eke]] - RNase HII - ''Methanocalcococcus jannaschii

'' <br />
+
**[[1eke]] - RNase HII - ''Methanocalcococcus jannaschii

''
*RNase HIII
*RNase HIII
Line 225: Line 225:
**[[4o1o]] - pRNase L + oligoadenylate + CMP – pig<br />
**[[4o1o]] - pRNase L + oligoadenylate + CMP – pig<br />
**[[4o1p]] - pRNase L + oligoadenylate + AMPPNP <br />
**[[4o1p]] - pRNase L + oligoadenylate + AMPPNP <br />
-
**[[4oav]] - hRNase L + oligoadenylate + AMPPCP + RNA<br />
+
**[[4oav]] - hRNase L + oligoadenylate + AMPPCP + RNA
*RNase LE
*RNase LE
Line 306: Line 306:
**[[1py3]], [[1pyl]] - SaRNase SA2<br />
**[[1py3]], [[1pyl]] - SaRNase SA2<br />
-
**[[3dgy]], [[3dh2]], [[3d4a]], [[3d5g]], [[3d5i]] - SaRNase SA2 + mononucleotide<br />
+
**[[3dgy]], [[3dh2]], [[3d4a]], [[3d5g]], [[3d5i]] - SaRNase SA2 + mononucleotide
*RNase SA3
*RNase SA3
Line 332: Line 332:
**[[1bvi]], [[2bu4]], [[2hoh]], [[4hoh]], [[5hoh]], [[3hoh]], [[2gsp]], [[3gsp]], [[4gsp]], [[5gsp]], [[6gsp]], [[7gsp]], [[1gsp]], [[1det]], [[1rls]], [[1lra]], [[1rga]],[[1bu4]], [[1rgc]], [[2rnt]], [[3bu4]], [[4bu4]], [[5bu4]], [[3syu]], [[3urp]] - AoRNase T1 + nucleotide<br />

**[[1bvi]], [[2bu4]], [[2hoh]], [[4hoh]], [[5hoh]], [[3hoh]], [[2gsp]], [[3gsp]], [[4gsp]], [[5gsp]], [[6gsp]], [[7gsp]], [[1gsp]], [[1det]], [[1rls]], [[1lra]], [[1rga]],[[1bu4]], [[1rgc]], [[2rnt]], [[3bu4]], [[4bu4]], [[5bu4]], [[3syu]], [[3urp]] - AoRNase T1 + nucleotide<br />

**[[3rnt]] - AoRNase T1 + V<br />
**[[3rnt]] - AoRNase T1 + V<br />
-
**[[1ygw]] - AoRNase T1 – NMR<BR />
+
**[[1ygw]] - AoRNase T1 – NMR
*RNase T2
*RNase T2
Line 353: Line 353:
**[[1y44]] - BsRNase Z (mutant)<br />
**[[1y44]] - BsRNase Z (mutant)<br />
**[[2cbn]] – EcRNase Z<br />
**[[2cbn]] – EcRNase Z<br />
-
**[[3v32]], [[3v33]], [[3v34]] – hRNase Z<br />
+
**[[3v32]], [[3v33]], [[3v34]] – hRNase Z
*α-sarcin
*α-sarcin
Line 374: Line 374:
**[[1e3h]], [[1e3p]] - PNPase - ''Streptomyces antibioticus''<br />
**[[1e3h]], [[1e3p]] - PNPase - ''Streptomyces antibioticus''<br />
**[[3gcm]], [[3gme]], [[3h1c]] - EcPNPase + RNase E recognition domain<br />
**[[3gcm]], [[3gme]], [[3h1c]] - EcPNPase + RNase E recognition domain<br />
-
**[[3h36]] - PNPase fragment - ''Streptococcus mutans''<br />
+
**[[3h36]] - PNPase fragment - ''Streptococcus mutans''
*Binase
*Binase
Line 380: Line 380:
**[[1gou]], [[1gov]], [[1goy]] – BiBinase – ''Bacillus intermedius''<br />
**[[1gou]], [[1gov]], [[1goy]] – BiBinase – ''Bacillus intermedius''<br />
**[[2rbi]], [[4haa]] – BiBinase (mutant)<br />
**[[2rbi]], [[4haa]] – BiBinase (mutant)<br />
-
**[[1buj]] – BiBinase – NMR<br />
+
**[[1buj]] – BiBinase – NMR
*Poly(A)-specific RNase
*Poly(A)-specific RNase
Line 396: Line 396:
**[[3iel]] - TtRNase + nucleotide<br />
**[[3iel]] - TtRNase + nucleotide<br />
**[[4b8a]] – yRNase pop2 + cell division cycle protein 39<br />
**[[4b8a]] – yRNase pop2 + cell division cycle protein 39<br />
-
**[[4b8c]] – yRNase pop2 + cell division cycle protein 39 + CCR4<br />
+
**[[4b8c]] – yRNase pop2 + cell division cycle protein 39 + CCR4
}}
}}
==References==
==References==

Revision as of 07:12, 9 December 2014

Ribonuclease A (magenta) complex with thymidilic acid DNA tetramer (pink), 1rta

Drag the structure with the mouse to rotate

3D Structures of Ribonuclease

Updated on 09-December-2014

References

  1. ↑ Birdsall DL, McPherson A. Crystal structure disposition of thymidylic acid tetramer in complex with ribonuclease A. J Biol Chem. 1992 Nov 5;267(31):22230-6. PMID:1429575
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