3mhz
From Proteopedia
(Difference between revisions)
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- | [[ | + | ==1.7A structure of 2-fluorohistidine labeled Protective Antigen== |
+ | <StructureSection load='3mhz' size='340' side='right' caption='[[3mhz]], [[Resolution|resolution]] 1.70Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[3mhz]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis Bacillus anthracis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MHZ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MHZ FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr> | ||
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=2HF:2-FLUORO-L-HISTIDINE'>2HF</scene></td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pagA, pag, pXO1-110, BXA0164, GBAA_pXO1_0164 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1392 Bacillus anthracis])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mhz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mhz OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3mhz RCSB], [http://www.ebi.ac.uk/pdbsum/3mhz PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mh/3mhz_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The protective antigen (PA) component of the anthrax toxin forms pores within the low pH environment of host endosomes through mechanisms that are poorly understood. It has been proposed that pore formation is dependent on histidine protonation. In previous work, we biosynthetically incorporated 2-fluorohistidine (2-FHis), an isosteric analogue of histidine with a significantly reduced pK(a) ( approximately 1), into PA and showed that the pH-dependent conversion from the soluble prepore to a pore was unchanged. However, we also observed that 2-FHisPA was nonfunctional in the ability to mediate cytotoxicity of CHO-K1 cells by LF(N)-DTA and was defective in translocation through planar lipid bilayers. Here, we show that the defect in cytotoxicity is due to both a defect in translocation and, when bound to the host cellular receptor, an inability to undergo low pH-induced pore formation. Combining X-ray crystallography with hydrogen-deuterium (H-D) exchange mass spectrometry, our studies lead to a model in which hydrogen bonds to the histidine ring are strengthened by receptor binding. The combination of both fluorination and receptor binding is sufficient to block low pH-induced pore formation. | ||
- | + | Evidence that histidine protonation of receptor-bound anthrax protective antigen is a trigger for pore formation.,Wimalasena DS, Janowiak BE, Lovell S, Miyagi M, Sun J, Zhou H, Hajduch J, Pooput C, Kirk KL, Battaile KP, Bann JG Biochemistry. 2010 Aug 24;49(33):6973-83. PMID:20672855<ref>PMID:20672855</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
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==See Also== | ==See Also== | ||
*[[Anthrax protective antigen|Anthrax protective antigen]] | *[[Anthrax protective antigen|Anthrax protective antigen]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | < | + | __TOC__ |
+ | </StructureSection> | ||
[[Category: Bacillus anthracis]] | [[Category: Bacillus anthracis]] | ||
- | [[Category: Bann, J G | + | [[Category: Bann, J G]] |
- | [[Category: Battaile, K P | + | [[Category: Battaile, K P]] |
- | [[Category: Hajduch, J | + | [[Category: Hajduch, J]] |
- | [[Category: Janowiak, B E | + | [[Category: Janowiak, B E]] |
- | [[Category: Kirk, K L | + | [[Category: Kirk, K L]] |
- | [[Category: Lovell, S | + | [[Category: Lovell, S]] |
- | [[Category: Miyagi, M | + | [[Category: Miyagi, M]] |
- | [[Category: Pooput, C | + | [[Category: Pooput, C]] |
- | [[Category: Sun, J | + | [[Category: Sun, J]] |
- | [[Category: Wimalasena, D S | + | [[Category: Wimalasena, D S]] |
[[Category: 2-fluorohistidine]] | [[Category: 2-fluorohistidine]] | ||
[[Category: Anthrax]] | [[Category: Anthrax]] |
Revision as of 09:18, 9 December 2014
1.7A structure of 2-fluorohistidine labeled Protective Antigen
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Categories: Bacillus anthracis | Bann, J G | Battaile, K P | Hajduch, J | Janowiak, B E | Kirk, K L | Lovell, S | Miyagi, M | Pooput, C | Sun, J | Wimalasena, D S | 2-fluorohistidine | Anthrax | Histidine | Hydrogen bonding | Pore | Receptor | Toxin