3naq
From Proteopedia
(Difference between revisions)
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| - | + | ==Apo-form of NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana== | |
| - | + | <StructureSection load='3naq' size='340' side='right' caption='[[3naq]], [[Resolution|resolution]] 1.70Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3naq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NAQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NAQ FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | |
| - | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3n7u|3n7u]], [[2gsd|2gsd]], [[3fn4|3fn4]], [[2nad|2nad]], [[2nac|2nac]], [[2fss|2fss]]</td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At5g14780, FDH, FDH1, T9L3_80 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])</td></tr> | |
| - | == | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Formate_dehydrogenase Formate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.2 1.2.1.2] </span></td></tr> |
| - | [[3naq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NAQ OCA]. | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3naq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3naq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3naq RCSB], [http://www.ebi.ac.uk/pdbsum/3naq PDBsum]</span></td></tr> |
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/na/3naq_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Formate dehydrogenase|Formate dehydrogenase]] | *[[Formate dehydrogenase|Formate dehydrogenase]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: Formate dehydrogenase]] | [[Category: Formate dehydrogenase]] | ||
| - | [[Category: Dorovatovskiy, P V | + | [[Category: Dorovatovskiy, P V]] |
| - | [[Category: Polyakov, K M | + | [[Category: Polyakov, K M]] |
| - | [[Category: Popov, V O | + | [[Category: Popov, V O]] |
| - | [[Category: Sadykhov, E G | + | [[Category: Sadykhov, E G]] |
| - | [[Category: Serov, A E | + | [[Category: Serov, A E]] |
| - | [[Category: Shabalin, I G | + | [[Category: Shabalin, I G]] |
| - | [[Category: Skirgello, O E | + | [[Category: Skirgello, O E]] |
| - | [[Category: Tishkov, V I | + | [[Category: Tishkov, V I]] |
[[Category: Apo-form]] | [[Category: Apo-form]] | ||
[[Category: Homodimer]] | [[Category: Homodimer]] | ||
[[Category: Nad-dependent formate dehydroganase]] | [[Category: Nad-dependent formate dehydroganase]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
Revision as of 09:27, 9 December 2014
Apo-form of NAD-dependent formate dehydrogenase from higher-plant Arabidopsis thaliana
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