3qqq

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[[Image:3qqq.png|left|200px]]
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==Crystal structure of non-symbiotic plant hemoglobin from Trema tomentosa==
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<StructureSection load='3qqq' size='340' side='right' caption='[[3qqq]], [[Resolution|resolution]] 1.84&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3qqq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trema_tomentosa Trema tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QQQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QQQ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qqr|3qqr]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">GLB1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3480 Trema tomentosa])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qqq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qqq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qqq RCSB], [http://www.ebi.ac.uk/pdbsum/3qqq PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Hemoglobins from the plants Parasponia andersonii (ParaHb) and Trema tomentosa (TremaHb) are 93% identical in primary structure but differ in oxygen binding constants in accordance with their distinct physiological functions. Additionally, these proteins are dimeric, and ParaHb exhibits the unusual property of having different heme redox potentials for each subunit. To investigate how these hemoglobins could differ in function despite their shared sequence identity, and to determine the cause of subunit heterogeneity in ParaHb, we have measured their crystal structures in the ferric oxidation state. Furthermore, we have made a monomeric ParaHb mutant protein (I43N) and measured its ferrous/ferric heme redox potential to test the hypothesized link between quaternary structure and heme heterogeneity in wild type ParaHb. Our results demonstrate that TremaHb is a symmetric dimeric hemoglobin similar to other class 1 nonsymbiotic plant hemoglobins, but that ParaHb has structurally distinct heme coordination in each of its two subunits that is absent in the monomeric I43N mutant protein. A mechanism for achieving structural heterogeneity in ParaHb is proposed, in which the Ile101(F4) side chain contacts the proximal His105(F8) in one subunit but not the other. These results are discussed in the context of the evolution of plant oxygen transport hemoglobins, and other potential functions of plant hemoglobins.
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{{STRUCTURE_3qqq| PDB=3qqq | SCENE= }}
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Crystal Structures of Parasponia and Trema Hemoglobins; Differential Heme Coordination is Linked to Quaternary Structure.,Kakar S, Sturms R, Tiffany A, Nix JC, Dispirito AA, Hargrove MS Biochemistry. 2011 Apr 14. PMID:21491905<ref>PMID:21491905</ref>
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===Crystal structure of non-symbiotic plant hemoglobin from Trema tomentosa===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_21491905}}
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==About this Structure==
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[[3qqq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trema_tomentosa Trema tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QQQ OCA].
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==See Also==
==See Also==
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*[[Hemoglobin|Hemoglobin]]
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*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:021491905</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Trema tomentosa]]
[[Category: Trema tomentosa]]
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[[Category: Dispirito, A.]]
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[[Category: Dispirito, A]]
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[[Category: Hargrove, M S.]]
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[[Category: Hargrove, M S]]
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[[Category: Kakar, S.]]
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[[Category: Kakar, S]]
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[[Category: Nix, J C.]]
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[[Category: Nix, J C]]
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[[Category: Savage, A.]]
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[[Category: Savage, A]]
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[[Category: Sturms, R.]]
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[[Category: Sturms, R]]
[[Category: Globin fold]]
[[Category: Globin fold]]
[[Category: Heme binding]]
[[Category: Heme binding]]

Revision as of 11:57, 9 December 2014

Crystal structure of non-symbiotic plant hemoglobin from Trema tomentosa

3qqq, resolution 1.84Å

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