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3nsq

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[[Image:3nsq.png|left|200px]]
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==Crystal structure of tetrameric RXRalpha-LBD complexed with antagonist danthron==
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<StructureSection load='3nsq' size='340' side='right' caption='[[3nsq]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3nsq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NSQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NSQ FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CHZ:1,8-DIHYDROXYANTHRACENE-9,10-DIONE'>CHZ</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3nsp|3nsp]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RXRA, NR2B1, RP11-473E2.1-002, hCG_18150 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nsq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nsq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nsq RCSB], [http://www.ebi.ac.uk/pdbsum/3nsq PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Retinoic X receptor (RXR) is a promising target for drug discovery against cancer and metabolic syndromes. Here, we identified a specific RXRalpha antagonist, danthron, from the traditional Chinese medicine rhubarb. Danthron repressed all tested RXRalpha-involved response element transcription, including the RXRE, PPRE, FXRE, and LXRE. Results from native PAGE and isothermal titration calorimetry (ITC)-based assays indicated that danthron bound to the tetrameric RXRalpha-LBD in a specific stoichimetric ratio, and such a binding could influence the corepressor SMRT affinity to the receptor. Additionally, a unique tetrameric structure of the apo-RXRalpha ligand-binding domain (LBD) was determined, which exhibited a larger tetramer interface and different ligand-binding pocket size compared with the one previously reported. Together with the biochemical and biophysical results, the determined crystal structure of danthron-soaked RXRalpha-LBD suggested a new mechanism for danthron antagonism to tetrameric RXRalpha. Moreover, the in vivo efficient improvement of insulin sensitivity by danthron was observed in diet-induced obese (DIO) mice. Thus, our findings were expected to supply new insights into the structural basis of RXRalpha antagonist for its further potential therapeutic application.
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{{STRUCTURE_3nsq| PDB=3nsq | SCENE= }}
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Danthron functions as a retinoic X receptor antagonist by stabilizing tetramers of the receptor.,Zhang H, Zhou R, Li L, Chen J, Chen L, Li C, Ding H, Yu L, Hu L, Jiang H, Shen X J Biol Chem. 2011 Jan 21;286(3):1868-75. Epub 2010 Nov 17. PMID:21084305<ref>PMID:21084305</ref>
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===Crystal structure of tetrameric RXRalpha-LBD complexed with antagonist danthron===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_21084305}}
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==About this Structure==
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[[3nsq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NSQ OCA].
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==See Also==
==See Also==
*[[Retinoid X receptor|Retinoid X receptor]]
*[[Retinoid X receptor|Retinoid X receptor]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:021084305</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Chen, L.]]
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[[Category: Chen, L]]
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[[Category: Hu, L.]]
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[[Category: Hu, L]]
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[[Category: Hu, T.]]
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[[Category: Hu, T]]
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[[Category: Jiang, H.]]
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[[Category: Jiang, H]]
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[[Category: Li, L.]]
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[[Category: Li, L]]
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[[Category: Shen, X.]]
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[[Category: Shen, X]]
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[[Category: Zhang, H.]]
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[[Category: Zhang, H]]
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[[Category: Zhou, R.]]
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[[Category: Zhou, R]]
[[Category: Nuclear receptor retinoic x recepor alpha ligand binding domain antagonist danthron]]
[[Category: Nuclear receptor retinoic x recepor alpha ligand binding domain antagonist danthron]]
[[Category: Transcription]]
[[Category: Transcription]]

Revision as of 13:50, 9 December 2014

Crystal structure of tetrameric RXRalpha-LBD complexed with antagonist danthron

3nsq, resolution 2.60Å

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