4b9y

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[[Image:4b9y.png|left|200px]]
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==Crystal Structure of Apo Agd31B, alpha-transglucosylase in Glycoside Hydrolase Family 31==
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<StructureSection load='4b9y' size='340' side='right' caption='[[4b9y]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4b9y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B9Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4B9Y FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=OXL:OXALATE+ION'>OXL</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4b9z|4b9z]], [[4ba0|4ba0]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-glucosidase Alpha-glucosidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.20 3.2.1.20] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4b9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b9y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4b9y RCSB], [http://www.ebi.ac.uk/pdbsum/4b9y PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The metabolism of the storage polysaccharides glycogen and starch are of vital importance to organisms from all domains of life. In bacteria, utilization of these alpha-glucans requires the concerted action of a variety of enzymes, including glycoside hydrolases, glycoside phosphorylases, and transglycosylases. In particular, transglycosylases from glycoside hydrolase families GH13 and GH77 play well-established roles in alpha-glucan sidechain (de)branching, regulation of oligo- and polysaccharide chain length, and formation of cyclic dextrans. Here, we present the biochemical and tertiary structural characterization of a new type of bacterial 1,4-alpha-glucan 4-alpha-glucosyltransferase from glycoside hydrolase family 31 (GH31). Distinct from 1,4-alpha-glucan 6-alpha-glucosyltransferases (EC 2.4.1.24) and 4-alpha-glucanotransferases (EC 2.4.1.25), this enzyme strictly transferred one glucosyl residue from alpha(1 --&gt;4) glucans in disproportionation reactions. Substrate hydrolysis was undetectable for a series of malto-oligosaccharides, except maltose, for which transglycosylation nonetheless dominated across a range of substrate concentrations. Crystallographic analysis of the enzyme in apo, acarbose-complexed, and trapped 5-beta-fluoroglucosyl-enzyme intermediate forms revealed extended substrate interactions across one negative and up to three positive subsites, thus providing structural rationalization for the unique, single-monosaccharide transferase activity of the enzyme.
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{{STRUCTURE_4b9y| PDB=4b9y | SCENE= }}
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Structural enzymology of Cellvibrio japonicus Agd31B reveals alpha-transglucosylase activity in glycoside hydrolase family 31.,Larsbrink J, Izumi A, Hemsworth GR, Davies GJ, Brumer H J Biol Chem. 2012 Nov 6. PMID:23132856<ref>PMID:23132856</ref>
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===Crystal Structure of Apo Agd31B, alpha-transglucosylase in Glycoside Hydrolase Family 31===
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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{{ABSTRACT_PUBMED_23132856}}
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== References ==
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<references/>
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==About this Structure==
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__TOC__
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[[4b9y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B9Y OCA].
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</StructureSection>
[[Category: Alpha-glucosidase]]
[[Category: Alpha-glucosidase]]
[[Category: Cellvibrio japonicus]]
[[Category: Cellvibrio japonicus]]
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[[Category: Brumer, H.]]
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[[Category: Brumer, H]]
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[[Category: Davies, G J.]]
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[[Category: Davies, G J]]
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[[Category: Hemsworth, G R.]]
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[[Category: Hemsworth, G R]]
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[[Category: Izumi, A.]]
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[[Category: Izumi, A]]
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[[Category: Larsbrink, J.]]
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[[Category: Larsbrink, J]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]

Revision as of 16:07, 9 December 2014

Crystal Structure of Apo Agd31B, alpha-transglucosylase in Glycoside Hydrolase Family 31

4b9y, resolution 1.90Å

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