4fg0
From Proteopedia
(Difference between revisions)
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- | [[ | + | ==Structure of the St. Louis Encephalitis Virus envelope protein in the fusogenic trimer conformation.== |
+ | <StructureSection load='4fg0' size='340' side='right' caption='[[4fg0]], [[Resolution|resolution]] 3.90Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4fg0]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/St._louis_encephalitis_virus St. louis encephalitis virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FG0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FG0 FirstGlance]. <br> | ||
+ | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ok8|1ok8]], [[1rer|1rer]], [[1urz|1urz]], [[3g7t|3g7t]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Envelope protein E ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11080 St. Louis encephalitis virus])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fg0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fg0 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fg0 RCSB], [http://www.ebi.ac.uk/pdbsum/4fg0 PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | St. Louis encephalitis virus (SLEV) is a mosquito borne flavivirus responsible for several human encephalitis outbreaks over the last 80 years. Mature flavivirus virions are coated with dimeric envelope (E) proteins that mediate attachment and fusion with host cells. E is a class II fusion protein, the hallmark of which is a distinct dimer-to-trimer rearrangement that occurs upon endosomal acidification and insertion of hydrophobic fusion peptides into the endosomal membrane. Herein, we report the crystal structure of SLEV E in the posfusion trimer conformation. The structure revealed specific features that differentiate SLEV E from trimers of related flavi- and alphaviruses. SLEV E fusion loops have distinct intermediate spacing such that they are positioned further apart than previously observed in flaviviruses but closer together than Semliki Forest Virus, an alphavirus. Domains II (DII) and III (DIII) of SLEV E also adopt different angles relative to domain I (DI) which suggests the DI-DII joint may accommodate spheroidal motions. However, trimer interfaces are well conserved amongst flaviviruses, so it is likely the differences observed represent structural features specific to SLEV function. Analysis of surface potentials revealed a basic platform underneath flavivirus fusion loops that may interact with the anionic lipid head groups found in membranes. Taken together, these results highlight variation in E structure and assembly that may direct virus-specific interactions with host determinants to influence pathogenesis. | ||
- | + | Structure of the St. Louis encephalitis virus postfusion envelope trimer.,Luca VC, Nelson CA, Fremont DH J Virol. 2012 Oct 31. PMID:23115296<ref>PMID:23115296</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | + | <references/> | |
- | == | + | __TOC__ |
- | + | </StructureSection> | |
[[Category: St. louis encephalitis virus]] | [[Category: St. louis encephalitis virus]] | ||
- | [[Category: | + | [[Category: Structural genomic]] |
- | [[Category: Fremont, D H | + | [[Category: Fremont, D H]] |
- | [[Category: Luca, V C | + | [[Category: Luca, V C]] |
- | [[Category: Nelson, C A | + | [[Category: Nelson, C A]] |
[[Category: Antibody epitope]] | [[Category: Antibody epitope]] | ||
- | [[Category: Center for structural genomics of infectious disease]] | ||
[[Category: Csgid]] | [[Category: Csgid]] | ||
[[Category: Flavivirus]] | [[Category: Flavivirus]] | ||
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[[Category: National institute of allergy and infectious disease]] | [[Category: National institute of allergy and infectious disease]] | ||
[[Category: Niaid]] | [[Category: Niaid]] | ||
- | [[Category: St. louis encephalitis virus]] | ||
- | [[Category: Structural genomic]] | ||
[[Category: Viral envelope protein]] | [[Category: Viral envelope protein]] | ||
[[Category: Viral protein]] | [[Category: Viral protein]] |
Revision as of 17:29, 9 December 2014
Structure of the St. Louis Encephalitis Virus envelope protein in the fusogenic trimer conformation.
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