4glk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:4glk.png|left|200px]]
+
==Structure and activity of AbiQ, a lactococcal anti-phage endoribonuclease belonging to the type-III toxin-antitoxin system==
 +
<StructureSection load='4glk' size='340' side='right' caption='[[4glk]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4glk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GLK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GLK FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">abiQ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1358 Lactococcus lactis])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4glk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4glk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4glk RCSB], [http://www.ebi.ac.uk/pdbsum/4glk PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
AbiQ is a phage resistance mechanism found on a native plasmid of Lactococcus lactis that abort virulent phage infections. In this study, we experimentally demonstrate that AbiQ belongs to the recently described type III toxin-antitoxin systems. When overexpressed, the AbiQ protein (ABIQ) is toxic and causes bacterial death in a bacteriostatic manner. Northern and Western blot experiments revealed that the abiQ gene is transcribed and translated constitutively, and its expression is not activated by a phage product. ABIQ is an endoribonuclease that specifically cleaves its cognate antitoxin RNA molecule in vivo. The crystal structure of ABIQ was solved and site-directed mutagenesis identified key amino acids for its anti-phage and/or its RNase function. The AbiQ system is the first lactococcal abortive infection system characterized to date at a structural level.
-
{{STRUCTURE_4glk| PDB=4glk | SCENE= }}
+
Structure and activity of AbiQ, a lactococcal endoribonuclease belonging to the type III toxin-antitoxin system.,Samson JE, Spinelli S, Cambillau C, Moineau S Mol Microbiol. 2012 Dec 20. doi: 10.1111/mmi.12129. PMID:23279123<ref>PMID:23279123</ref>
-
===Structure and activity of AbiQ, a lactococcal anti-phage endoribonuclease belonging to the type-III toxin-antitoxin system===
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
 
+
</div>
-
{{ABSTRACT_PUBMED_23279123}}
+
== References ==
-
 
+
<references/>
-
==About this Structure==
+
__TOC__
-
[[4glk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lactococcus_lactis Lactococcus lactis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GLK OCA].
+
</StructureSection>
[[Category: Lactococcus lactis]]
[[Category: Lactococcus lactis]]
-
[[Category: Cambillau, C.]]
+
[[Category: Cambillau, C]]
-
[[Category: Moineau, S.]]
+
[[Category: Moineau, S]]
-
[[Category: Samson, J.]]
+
[[Category: Samson, J]]
-
[[Category: Spinelli, S.]]
+
[[Category: Spinelli, S]]
[[Category: Alpha beta]]
[[Category: Alpha beta]]
[[Category: Endonuclease]]
[[Category: Endonuclease]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Rna antiq]]
[[Category: Rna antiq]]

Revision as of 09:45, 10 December 2014

Structure and activity of AbiQ, a lactococcal anti-phage endoribonuclease belonging to the type-III toxin-antitoxin system

4glk, resolution 2.16Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools