3nqx

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{{STRUCTURE_3nqx| PDB=3nqx | SCENE= }}
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==Crystal structure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family==
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===Crystal structure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family===
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<StructureSection load='3nqx' size='340' side='right' caption='[[3nqx]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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{{ABSTRACT_PUBMED_20876133}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3nqx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseu9 Pseu9]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NQX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NQX FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3nqy|3nqy]], [[3nqz|3nqz]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Vibriolysin Vibriolysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.25 3.4.24.25] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nqx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nqx RCSB], [http://www.ebi.ac.uk/pdbsum/3nqx PDBsum]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nq/3nqx_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Thermolysin-like proteases (TLPs), a large group of zinc metalloproteases, are synthesized as inactive precursors. TLPs with a long propeptide ( approximately 200 residues) undergo maturation following autoprocessing through an elusive molecular mechanism. We report the first two crystal structures for the autoprocessed complexes of a typical TLP, MCP-02. In the autoprocessed complex, Ala205 shifts upward by 33 A from the previously covalently linked residue, His204, indicating that, following autocleavage of the peptide bond between His204 and Ala205, a large conformational change from the zymogen to the autoprocessed complex occurs. The eight N-terminal residues (residues Ala205-Gly212) of the catalytic domain form a new beta-strand, nestling into two other beta-strands. Simultaneously, the apparent T(m) of the autoprocessed complex increases 20 degrees C compared to that of the zymogen. The stepwise degradation of the propeptide begins with two sequential cuttings at Ser49-Val50 and Gly57-Leu58, which lead to the disassembly of the propeptide and the formation of mature MCP-02. Our findings give new insights into the molecular mechanism of TLP maturation.
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==About this Structure==
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Structural basis for the autoprocessing of zinc metalloproteases in the thermolysin family.,Gao X, Wang J, Yu DQ, Bian F, Xie BB, Chen XL, Zhou BC, Lai LH, Wang ZX, Wu JW, Zhang YZ Proc Natl Acad Sci U S A. 2010 Oct 12;107(41):17569-74. Epub 2010 Sep 27. PMID:20876133<ref>PMID:20876133</ref>
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[[3nqx]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudoalteromonas_sp. Pseudoalteromonas sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NQX OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:020876133</ref><references group="xtra"/><references/>
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</div>
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[[Category: Pseudoalteromonas sp.]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Pseu9]]
[[Category: Vibriolysin]]
[[Category: Vibriolysin]]
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[[Category: Gao, X.]]
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[[Category: Gao, X]]
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[[Category: Wang, J.]]
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[[Category: Wang, J]]
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[[Category: Wu, J W.]]
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[[Category: Wu, J W]]
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[[Category: Zhang, Y Z.]]
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[[Category: Zhang, Y Z]]
[[Category: Alpha/beta protein]]
[[Category: Alpha/beta protein]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Zinc metalloprotease]]
[[Category: Zinc metalloprotease]]

Revision as of 12:04, 10 December 2014

Crystal structure of vibriolysin MCP-02 mature enzyme, a zinc metalloprotease from M4 family

3nqx, resolution 1.70Å

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