1opo

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[[Image:1opo.gif|left|200px]]<br /><applet load="1opo" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1opo.gif|left|200px]]
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caption="1opo, resolution 3.20&Aring;" />
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'''THE STRUCTURE OF CARNATION MOTTLE VIRUS'''<br />
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{{Structure
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|PDB= 1opo |SIZE=350|CAPTION= <scene name='initialview01'>1opo</scene>, resolution 3.20&Aring;
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|SITE=
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|LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=CA:CALCIUM ION'>CA</scene>
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|ACTIVITY=
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|GENE=
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}}
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'''THE STRUCTURE OF CARNATION MOTTLE VIRUS'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1OPO is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Carnation_mottle_virus Carnation mottle virus] with <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=CA:'>CA</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OPO OCA].
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1OPO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Carnation_mottle_virus Carnation mottle virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OPO OCA].
==Reference==
==Reference==
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The atomic structure of Carnation Mottle Virus capsid protein., Morgunova EYu, Dauter Z, Fry E, Stuart DI, Stel'mashchuk VYa, Mikhailov AM, Wilson KS, Vainshtein BK, FEBS Lett. 1994 Feb 7;338(3):267-71. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8307192 8307192]
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The atomic structure of Carnation Mottle Virus capsid protein., Morgunova EYu, Dauter Z, Fry E, Stuart DI, Stel'mashchuk VYa, Mikhailov AM, Wilson KS, Vainshtein BK, FEBS Lett. 1994 Feb 7;338(3):267-71. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8307192 8307192]
[[Category: Carnation mottle virus]]
[[Category: Carnation mottle virus]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: x-ray diffraction]]
[[Category: x-ray diffraction]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:20:16 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:13:57 2008''

Revision as of 11:13, 20 March 2008

Image:1opo.gif


PDB ID 1opo

Drag the structure with the mouse to rotate
, resolution 3.20Å
Ligands: and
Coordinates: save as pdb, mmCIF, xml



THE STRUCTURE OF CARNATION MOTTLE VIRUS


Overview

The structure of the Carnation Mottle Virus (CMtV) capsid protein has been determined at 3.2 A resolution by the method of molecular replacement. Three-dimensional data were collected from a small number of crystals (sp.g. I23, a = 382.6 A) using the synchrotron radiation with an image plate as detector. The coordinates of Tomato Bushy Stunt Virus (TBSV) were used as a searching model. Refinement of the coordinates of 7,479 non-hydrogen atoms performed by the program XPLOR, has led to an R-factor of 18.3%. It was found that the amino acid chain fold of capsid protein is very similar to that in other icosahedral viruses. However, there are some differences in the contact regions between protein subunits and also the lack of the beta-annulus around the 3-fold icosahedral axes. The structural and biochemical results lead us to consider an alternative assembly pathway.

About this Structure

1OPO is a Single protein structure of sequence from Carnation mottle virus. Full crystallographic information is available from OCA.

Reference

The atomic structure of Carnation Mottle Virus capsid protein., Morgunova EYu, Dauter Z, Fry E, Stuart DI, Stel'mashchuk VYa, Mikhailov AM, Wilson KS, Vainshtein BK, FEBS Lett. 1994 Feb 7;338(3):267-71. PMID:8307192

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