Sandbox Reserved 959

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== Defensin ==
== Defensin ==
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The calsequestrin 2 plays a major role here, because it regulates the release of the calcium in the cytosol while the membrane depolarization occurs and traps the calcium inside the lumen of the sarcoplasmic reticulum.<ref name="CASQ2 role">NCBI Gene Ressource: CASQ2 calsequestrin 2 http://www.ncbi.nlm.nih.gov/gene/845</ref>
 
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It is also good to notice that a huge release of calcium in the cytosol would be lethal to the cell, since the calcium would precipitate with the free phosphate groups.
 
== Structure ==
== Structure ==
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=== Monomere Structure ===
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=== Defensin ===
Each monomer is divided in <scene name='56/568018/Monomer_structure/5'>3 thioredoxin domains (TRX)</scene>: <scene name='56/568018/Monomer_structure/9'>the N-term</scene>, <scene name='56/568018/Monomer_structure/10'>the middle</scene> and the <scene name='56/568018/Monomer_structure/11'>C-term</scene> domains. Each of these has a regular structure: a <scene name='56/568018/Beta_sheet/4'>5 strands beta sheet core</scene> surrounded by <scene name='56/568018/Alpha_helix/3'>4 alpha helices</scene>.<ref name="Martin">PMID:7788290</ref>
Each monomer is divided in <scene name='56/568018/Monomer_structure/5'>3 thioredoxin domains (TRX)</scene>: <scene name='56/568018/Monomer_structure/9'>the N-term</scene>, <scene name='56/568018/Monomer_structure/10'>the middle</scene> and the <scene name='56/568018/Monomer_structure/11'>C-term</scene> domains. Each of these has a regular structure: a <scene name='56/568018/Beta_sheet/4'>5 strands beta sheet core</scene> surrounded by <scene name='56/568018/Alpha_helix/3'>4 alpha helices</scene>.<ref name="Martin">PMID:7788290</ref>
Usually these domains are involved in redox phenomena, which lead to disulfide bounds creation. Here these domains are inactive but play an important role in the polymerization of CASQ2.<ref name="Monomere structure">NCBI Structure Ressource: CASQ2 calsequestrin 2 http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?ascbin=8&maxaln=10&seltype=2&uid=239372&querygi=429544235&aln=1,227,0,109</ref>
Usually these domains are involved in redox phenomena, which lead to disulfide bounds creation. Here these domains are inactive but play an important role in the polymerization of CASQ2.<ref name="Monomere structure">NCBI Structure Ressource: CASQ2 calsequestrin 2 http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?ascbin=8&maxaln=10&seltype=2&uid=239372&querygi=429544235&aln=1,227,0,109</ref>

Revision as of 12:23, 17 December 2014

This Sandbox is Reserved from 06/12/2018, through 30/06/2019 for use in the course "Structural Biology" taught by Bruno Kieffer at the University of Strasbourg, ESBS. This reservation includes Sandbox Reserved 1480 through Sandbox Reserved 1543.
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PDB ID 2vaf

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References

  1. Cerrone M, Napolitano C, Priori SG. Catecholaminergic polymorphic ventricular tachycardia: A paradigm to understand mechanisms of arrhythmias associated to impaired Ca(2+) regulation. Heart Rhythm. 2009 Nov;6(11):1652-9. doi: 10.1016/j.hrthm.2009.06.033. Epub 2009 , Jun 30. PMID:19879546 doi:http://dx.doi.org/10.1016/j.hrthm.2009.06.033
  2. Martin JL. Thioredoxin--a fold for all reasons. Structure. 1995 Mar 15;3(3):245-50. PMID:7788290
  3. NCBI Structure Ressource: CASQ2 calsequestrin 2 http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?ascbin=8&maxaln=10&seltype=2&uid=239372&querygi=429544235&aln=1,227,0,109
  4. Polymerization of Calsequestrin: IMPLICATIONS FOR Ca2+ and REGULATION (Park et al., 2003) http://www.jbc.org/content/278/18/16176.full.pdf+html
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 Crystal Structure of calsequestrin from rabbit skeletal muscle sarcoplasmic reticulum (Wang et al., 1998) http://www.nature.com/nsmb/journal/v5/n6/abs/nsb0698-476.html
  6. NCBI Structure Ressource: CASQ2 calsequestrin 2 http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi
  7. The Asp-rich region at the carboxyl-terminus of calsequestrin binds to Ca2+ and interacts with triadin (Shin et al., 2000) http://www.sciencedirect.com/science/article/pii/S0014579300022468
  8. 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 Beard NA, Laver DR, Dulhunty AF. Calsequestrin and the calcium release channel of skeletal and cardiac muscle. Prog Biophys Mol Biol. 2004 May;85(1):33-69. PMID:15050380 doi:http://dx.doi.org/10.1016/j.pbiomolbio.2003.07.001
  9. 9.0 9.1 9.2 9.3 9.4 9.5 Beard NA, Casarotto MG, Wei L, Varsanyi M, Laver DR, Dulhunty AF. Regulation of ryanodine receptors by calsequestrin: effect of high luminal Ca2+ and phosphorylation. Biophys J. 2005 May;88(5):3444-54. Epub 2005 Feb 24. PMID:15731387 doi:http://dx.doi.org/10.1529/biophysj.104.051441

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