2ont
From Proteopedia
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- | + | ==A swapped dimer of the HIV-1 capsid C-terminal domain== | |
- | + | <StructureSection load='2ont' size='340' side='right' caption='[[2ont]], [[Resolution|resolution]] 2.40Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[2ont]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human_immunodeficiency_virus_type_1_(new_york-5_isolate) Human immunodeficiency virus type 1 (new york-5 isolate)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ONT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ONT FirstGlance]. <br> | ||
+ | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">gag-pol ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=11698 Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ont FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ont OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ont RCSB], [http://www.ebi.ac.uk/pdbsum/2ont PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Assembly of the HIV and other retroviruses is primarily driven by the oligomerization of the Gag polyprotein, the major viral structural protein capable of forming virus-like particles even in the absence of all other virally encoded components. Several critical determinants of Gag oligomerization are located in the C-terminal domain of the capsid protein (CA-CTD), which encompasses the most conserved segment in the highly variable Gag protein called the major homology region (MHR). The CA-CTD is thought to function as a dimerization module, although the existing model of CA-CTD dimerization does not readily explain why the conserved residues of the MHR are essential for retroviral assembly. Here we describe an x-ray structure of a distinct domain-swapped variant of the HIV-1 CA-CTD dimer stabilized by a single amino acid deletion. In the domain-swapped structure, the MHR-containing segment forms a major part of the dimerization interface, providing a structural mechanism for the enigmatic function of the MHR in HIV assembly. Our observations suggest that swapping of the MHR segments of adjacent Gag molecules may be a critical intermediate in retroviral assembly. | ||
- | + | Domain-swapped dimerization of the HIV-1 capsid C-terminal domain.,Ivanov D, Tsodikov OV, Kasanov J, Ellenberger T, Wagner G, Collins T Proc Natl Acad Sci U S A. 2007 Mar 13;104(11):4353-8. Epub 2007 Mar 5. PMID:17360528<ref>PMID:17360528</ref> | |
- | + | ||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
==See Also== | ==See Also== | ||
- | *[[Hiv-1 gag|Hiv-1 gag]] | ||
*[[Virus coat protein|Virus coat protein]] | *[[Virus coat protein|Virus coat protein]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | < | + | __TOC__ |
- | [[Category: Collins, T | + | </StructureSection> |
- | [[Category: Ellenberger, T | + | [[Category: Collins, T]] |
- | [[Category: Ivanov, D | + | [[Category: Ellenberger, T]] |
- | [[Category: Kasanov, J | + | [[Category: Ivanov, D]] |
- | [[Category: Tsodikov, O V | + | [[Category: Kasanov, J]] |
- | [[Category: Wagner, G | + | [[Category: Tsodikov, O V]] |
+ | [[Category: Wagner, G]] | ||
[[Category: Capsid]] | [[Category: Capsid]] | ||
[[Category: Domain swap]] | [[Category: Domain swap]] |
Revision as of 13:48, 17 December 2014
A swapped dimer of the HIV-1 capsid C-terminal domain
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Categories: Collins, T | Ellenberger, T | Ivanov, D | Kasanov, J | Tsodikov, O V | Wagner, G | Capsid | Domain swap | Gag | Hiv | Viral protein