3frp
From Proteopedia
(Difference between revisions)
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- | + | ==Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb== | |
- | + | <StructureSection load='3frp' size='340' side='right' caption='[[3frp]], [[Resolution|resolution]] 2.61Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[3frp]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Naja_kaouthia Naja kaouthia]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FRP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FRP FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3frp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3frp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3frp RCSB], [http://www.ebi.ac.uk/pdbsum/3frp PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | == Evolutionary Conservation == | ||
+ | [[Image:Consurf_key_small.gif|200px|right]] | ||
+ | Check<jmol> | ||
+ | <jmolCheckbox> | ||
+ | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fr/3frp_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Cobra venom factor (CVF) is a functional analog of human complement component C3b, the active fragment of C3. Similar to C3b, in human and mammalian serum, CVF binds factor B, which is then cleaved by factor D, giving rise to the CVFBb complex that targets the same scissile bond in C3 as the authentic complement convertases C4bC2a and C3bBb. Unlike the latter, CVFBb is a stable complex and an efficient C5 convertase. We solved the crystal structure of CVF, isolated from Naja naja kouthia venom, at 2.6 A resolution. The CVF crystal structure, an intermediate between C3b and C3c, lacks the TED domain and has the CUB domain in an identical position to that seen in C3b. The similarly positioned CUB and slightly displaced C345c domains of CVF could play a vital role in the formation of C3 convertases by providing important primary binding sites for factor B. | ||
- | + | The crystal structure of cobra venom factor, a cofactor for C3- and C5-convertase CVFBb.,Krishnan V, Ponnuraj K, Xu Y, Macon K, Volanakis JE, Narayana SV Structure. 2009 Apr 15;17(4):611-9. PMID:19368894<ref>PMID:19368894</ref> | |
- | + | ||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
==See Also== | ==See Also== | ||
*[[Cobra venom factor|Cobra venom factor]] | *[[Cobra venom factor|Cobra venom factor]] | ||
- | + | == References == | |
- | == | + | <references/> |
- | < | + | __TOC__ |
+ | </StructureSection> | ||
[[Category: Naja kaouthia]] | [[Category: Naja kaouthia]] | ||
- | [[Category: Krishnan, V | + | [[Category: Krishnan, V]] |
- | [[Category: Narayana, S V.L | + | [[Category: Narayana, S V.L]] |
[[Category: Cobra venom factor]] | [[Category: Cobra venom factor]] | ||
[[Category: Complement alternate pathway]] | [[Category: Complement alternate pathway]] |
Revision as of 13:59, 17 December 2014
Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb
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Categories: Naja kaouthia | Krishnan, V | Narayana, S V.L | Cobra venom factor | Complement alternate pathway | Complement c3 and c5 convertase cvfbb | Complement pathway | Complement protein | Glycoprotein | Hydrolase cofactor | Immune response | Inflammatory response | Innate immunity | Naja naja kouthia | Secreted | Thioester bond | Toxin