2rng
From Proteopedia
(Difference between revisions)
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- | + | ==Solution structure of big defensin== | |
- | === | + | <StructureSection load='2rng' size='340' side='right' caption='[[2rng]], [[NMR_Ensembles_of_Models | 25 NMR models]]' scene=''> |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[2rng]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Tachypleus_tridentatus Tachypleus tridentatus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2RNG FirstGlance]. <br> | ||
+ | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rng OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2rng RCSB], [http://www.ebi.ac.uk/pdbsum/2rng PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Big defensin is a 79-residue peptide derived from hemocytes of the Japanese horseshoe crab. It has antimicrobial activities against Gram-positive and -negative bacteria. The amino acid sequence of big defensin can be divided into an N-terminal hydrophobic half and a C-terminal cationic half. Interestingly, the trypsin cleaves big defensin into two fragments, the N-terminal and C-terminal fragments, which are responsible for antimicrobial activity against Gram-positive and -negative bacteria, respectively. To explore the antimicrobial mechanism of big defensin, we determined the solution structure of mature big defensin and performed a titration experiment with DPC micelles. Big defensin has a novel defensin structure; the C-terminal domain adopts a beta-defensin structure, and the N-terminal domain forms a unique globular conformation. It is noteworthy that the hydrophobic N-terminal domain undergoes a conformational change in micelle solution, while the C-terminal domain remains unchanged. Here, we propose that the N-terminal domain achieves its antimicrobial activity in a novel fashion and explain that big defensin has developed a strategy different from those of other beta-defensins to suppress the growth of Gram-positive bacteria. | ||
- | + | A novel beta-defensin structure: a potential strategy of big defensin for overcoming resistance by Gram-positive bacteria.,Kouno T, Fujitani N, Mizuguchi M, Osaki T, Nishimura S, Kawabata S, Aizawa T, Demura M, Nitta K, Kawano K Biochemistry. 2008 Oct 7;47(40):10611-9. Epub 2008 Sep 12. PMID:18785751<ref>PMID:18785751</ref> | |
- | + | ||
+ | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
+ | </div> | ||
==See Also== | ==See Also== | ||
*[[Defensin|Defensin]] | *[[Defensin|Defensin]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Tachypleus tridentatus]] | [[Category: Tachypleus tridentatus]] | ||
- | [[Category: Aizawa, T | + | [[Category: Aizawa, T]] |
- | [[Category: Demura, M | + | [[Category: Demura, M]] |
- | [[Category: Fujitani, N | + | [[Category: Fujitani, N]] |
- | [[Category: Kawabata, S | + | [[Category: Kawabata, S]] |
- | [[Category: Kawano, K | + | [[Category: Kawano, K]] |
- | [[Category: Kouno, T | + | [[Category: Kouno, T]] |
- | [[Category: Mizuguchi, M | + | [[Category: Mizuguchi, M]] |
- | [[Category: Nishimura, S | + | [[Category: Nishimura, S]] |
- | [[Category: Nitta, K | + | [[Category: Nitta, K]] |
- | [[Category: Osaki, T | + | [[Category: Osaki, T]] |
[[Category: Alpha-helices & beta-sheet]] | [[Category: Alpha-helices & beta-sheet]] | ||
[[Category: Antibiotic]] | [[Category: Antibiotic]] |
Revision as of 14:07, 17 December 2014
Solution structure of big defensin
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