3i9y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3i9y" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_3i9y| PDB=3i9y | SCENE= }}
+
==Crystal structure of the V. parahaemolyticus histidine kinase sensor TorS sensor domain==
-
===Crystal structure of the V. parahaemolyticus histidine kinase sensor TorS sensor domain===
+
<StructureSection load='3i9y' size='340' side='right' caption='[[3i9y]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
-
{{ABSTRACT_PUBMED_19748340}}
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3i9y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I9Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I9Y FirstGlance]. <br>
 +
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">torS, VPA0675 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=670 Vibrio parahaemolyticus])</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histidine_kinase Histidine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.13.3 2.7.13.3] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i9y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i9y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i9y RCSB], [http://www.ebi.ac.uk/pdbsum/3i9y PDBsum]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i9/3i9y_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Histidine kinase receptors respond to diverse signals and mediate signal transduction across the plasma membrane in all prokaryotes and certain eukaryotes. Each receptor is part of a two-component system that regulates a particular cellular process. Organisms that use trimethylamine-N-oxide (TMAO) as a terminal electron acceptor typically control their anaerobic respiration through the TMAO reductase (Tor) pathway, which the TorS histidine kinase activates when sensing TMAO in the environment. We have determined crystal structures for the periplasmic sensor domains of TorS receptors from Escherichia coli and Vibrio parahaemolyticus. TorS sensor domains have a novel fold consisting of a membrane-proximal right-handed four-helical bundle and a membrane-distal left-handed four-helical bundle, but conformational dispositions differ significantly in the two structures. Isolated TorS sensor domains dimerize in solution; and from comparisons with dimeric NarX and Tar sensors, we postulate that signaling through TorS dimers involves a piston-type displacement between helices.
-
==About this Structure==
+
Structural analysis of sensor domains from the TMAO-responsive histidine kinase receptor TorS.,Moore JO, Hendrickson WA Structure. 2009 Sep 9;17(9):1195-204. PMID:19748340<ref>PMID:19748340</ref>
-
[[3i9y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I9Y OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:019748340</ref><references group="xtra"/>
+
</div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Histidine kinase]]
[[Category: Histidine kinase]]
[[Category: Vibrio parahaemolyticus]]
[[Category: Vibrio parahaemolyticus]]
-
[[Category: Hendrickson, W A.]]
+
[[Category: Hendrickson, W A]]
-
[[Category: Moore, J O.]]
+
[[Category: Moore, J O]]
[[Category: Atp-binding]]
[[Category: Atp-binding]]
[[Category: Kinase]]
[[Category: Kinase]]

Revision as of 05:59, 18 December 2014

Crystal structure of the V. parahaemolyticus histidine kinase sensor TorS sensor domain

3i9y, resolution 2.16Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3i9y"
Personal tools