This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3i1f
From Proteopedia
(Difference between revisions)
m (Protected "3i1f" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p== | |
| - | + | <StructureSection load='3i1f' size='340' side='right' caption='[[3i1f]], [[Resolution|resolution]] 2.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3i1f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I1F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3I1F FirstGlance]. <br> |
| - | [[3i1f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3I1F OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2plf|2plf]], [[2pmd|2pmd]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">eif2g ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3i1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3i1f OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3i1f RCSB], [http://www.ebi.ac.uk/pdbsum/3i1f PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i1/3i1f_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Sulfolobus solfataricus]] | [[Category: Sulfolobus solfataricus]] | ||
| - | [[Category: Blaesi, U | + | [[Category: Blaesi, U]] |
| - | [[Category: Garber, M B | + | [[Category: Garber, M B]] |
| - | [[Category: Nikonov, O S | + | [[Category: Nikonov, O S]] |
| - | [[Category: Nikonov, S V | + | [[Category: Nikonov, S V]] |
| - | [[Category: Nikulin, A D | + | [[Category: Nikulin, A D]] |
| - | [[Category: Stolboushkina, E A | + | [[Category: Stolboushkina, E A]] |
[[Category: Aif2]] | [[Category: Aif2]] | ||
[[Category: Gdpcp]] | [[Category: Gdpcp]] | ||
Revision as of 06:32, 18 December 2014
Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p
| |||||||||||
Categories: Sulfolobus solfataricus | Blaesi, U | Garber, M B | Nikonov, O S | Nikonov, S V | Nikulin, A D | Stolboushkina, E A | Aif2 | Gdpcp | Gtp-binding | Initiation factor | Initiation factor 2 gamma subunit | Initiation of the translation | Mrna binding | Nucleotide binding | Nucleotide-binding | Protein biosynthesis | Translation

