3lxs

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{{STRUCTURE_3lxs| PDB=3lxs | SCENE= }}
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==Crystal structure analysis of cruzain bound to vinyl sulfone derived inhibitor (WRR483)==
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===Crystal structure analysis of cruzain bound to vinyl sulfone derived inhibitor (WRR483)===
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<StructureSection load='3lxs' size='340' side='right' caption='[[3lxs]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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{{ABSTRACT_PUBMED_20856868}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3lxs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_cruzi Trypanosoma cruzi]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2efm 2efm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LXS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LXS FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4MC:(Z)-N-(5-GUANIDINO-1-OXO-1-(5-PHENYL-1-(PHENYLSULFONYL)PENT-1-EN-3-YLAMINO)PENTAN-2-YL)-4-METHYLPIPERAZINE-1-CARBOXAMIDE'>4MC</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cruzipain ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5693 Trypanosoma cruzi])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Cruzipain Cruzipain], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.22.51 3.4.22.51] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lxs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lxs OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lxs RCSB], [http://www.ebi.ac.uk/pdbsum/3lxs PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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BACKGROUND: Cruzain, the major cysteine protease of Trypanosoma cruzi, is an essential enzyme for the parasite life cycle and has been validated as a viable target to treat Chagas' disease. As a proof-of-concept, K11777, a potent inhibitor of cruzain, was found to effectively eliminate T. cruzi infection and is currently a clinical candidate for treatment of Chagas' disease. METHODOLOGY/PRINCIPAL FINDINGS: WRR-483, an analog of K11777, was synthesized and evaluated as an inhibitor of cruzain and against T. cruzi proliferation in cell culture. This compound demonstrates good potency against cruzain with sensitivity to pH conditions and high efficacy in the cell culture assay. Furthermore, WRR-483 also eradicates parasite infection in a mouse model of acute Chagas' disease. To determine the atomic-level details of the inhibitor interacting with cruzain, a 1.5 A crystal structure of the protease in complex with WRR-483 was solved. The structure illustrates that WRR-483 binds covalently to the active site cysteine of the protease in a similar manner as other vinyl sulfone-based inhibitors. Details of the critical interactions within the specificity binding pocket are also reported. CONCLUSIONS: We demonstrate that WRR-483 is an effective cysteine protease inhibitor with trypanocidal activity in cell culture and animal model with comparable efficacy to K11777. Crystallographic evidence confirms that the mode of action is by targeting the active site of cruzain. Taken together, these results suggest that WRR-483 has potential to be developed as a treatment for Chagas' disease.
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==About this Structure==
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In vitro and in vivo studies of the trypanocidal properties of WRR-483 against Trypanosoma cruzi.,Chen YT, Brinen LS, Kerr ID, Hansell E, Doyle PS, McKerrow JH, Roush WR PLoS Negl Trop Dis. 2010 Sep 14;4(9). pii: e825. PMID:20856868<ref>PMID:20856868</ref>
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[[3lxs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_cruzi Trypanosoma cruzi]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2efm 2efm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LXS OCA].
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
==See Also==
==See Also==
*[[Cruzain|Cruzain]]
*[[Cruzain|Cruzain]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:020856868</ref><references group="xtra"/>
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__TOC__
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</StructureSection>
[[Category: Cruzipain]]
[[Category: Cruzipain]]
[[Category: Trypanosoma cruzi]]
[[Category: Trypanosoma cruzi]]
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[[Category: Brinen, L S.]]
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[[Category: Brinen, L S]]
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[[Category: Kerr, I D.]]
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[[Category: Kerr, I D]]
[[Category: Covalent inhibitor]]
[[Category: Covalent inhibitor]]
[[Category: Cysteine protease]]
[[Category: Cysteine protease]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Vinyl sulfonamide]]
[[Category: Vinyl sulfonamide]]

Revision as of 08:21, 18 December 2014

Crystal structure analysis of cruzain bound to vinyl sulfone derived inhibitor (WRR483)

3lxs, resolution 1.50Å

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