3muu
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
- | + | ==Crystal structure of the Sindbis virus E2-E1 heterodimer at low pH== | |
- | + | <StructureSection load='3muu' size='340' side='right' caption='[[3muu]], [[Resolution|resolution]] 3.29Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[3muu]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Sindbis_virus Sindbis virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MUU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MUU FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr> | ||
+ | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3muu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3muu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3muu RCSB], [http://www.ebi.ac.uk/pdbsum/3muu PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Alphaviruses are enveloped RNA viruses that have a diameter of about 700 A and can be lethal human pathogens. Entry of virus into host cells by endocytosis is controlled by two envelope glycoproteins, E1 and E2. The E2-E1 heterodimers form 80 trimeric spikes on the icosahedral virus surface, 60 with quasi-three-fold symmetry and 20 coincident with the icosahedral three-fold axes arranged with T = 4 quasi-symmetry. The E1 glycoprotein has a hydrophobic fusion loop at one end and is responsible for membrane fusion. The E2 protein is responsible for receptor binding and protects the fusion loop at neutral pH. The lower pH in the endosome induces the virions to undergo an irreversible conformational change in which E2 and E1 dissociate and E1 forms homotrimers, triggering fusion of the viral membrane with the endosomal membrane and then releasing the viral genome into the cytoplasm. Here we report the structure of an alphavirus spike, crystallized at low pH, representing an intermediate in the fusion process and clarifying the maturation process. The trimer of E2-E1 in the crystal structure is similar to the spikes in the neutral pH virus except that the E2 middle region is disordered, exposing the fusion loop. The amino- and carboxy-terminal domains of E2 each form immunoglobulin-like folds, consistent with the receptor attachment properties of E2. | ||
- | + | Structural changes of envelope proteins during alphavirus fusion.,Li L, Jose J, Xiang Y, Kuhn RJ, Rossmann MG Nature. 2010 Dec 2;468(7324):705-8. PMID:21124457<ref>PMID:21124457</ref> | |
- | + | ||
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | == | + | ==See Also== |
- | + | *[[Virus coat protein|Virus coat protein]] | |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Sindbis virus]] | [[Category: Sindbis virus]] | ||
- | [[Category: Jose, J | + | [[Category: Jose, J]] |
- | [[Category: Kuhn, R J | + | [[Category: Kuhn, R J]] |
- | [[Category: Li, L | + | [[Category: Li, L]] |
- | [[Category: Rossmann, M G | + | [[Category: Rossmann, M G]] |
- | [[Category: Xiang, Y | + | [[Category: Xiang, Y]] |
[[Category: Beta barrel]] | [[Category: Beta barrel]] | ||
[[Category: Ig-like fold]] | [[Category: Ig-like fold]] | ||
[[Category: Viral protein]] | [[Category: Viral protein]] |
Revision as of 15:08, 18 December 2014
Crystal structure of the Sindbis virus E2-E1 heterodimer at low pH
|
Categories: Sindbis virus | Jose, J | Kuhn, R J | Li, L | Rossmann, M G | Xiang, Y | Beta barrel | Ig-like fold | Viral protein