This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3k25
From Proteopedia
(Difference between revisions)
m (Protected "3k25" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal Structure of Slr1438 protein from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR112== | |
| - | + | <StructureSection load='3k25' size='340' side='right' caption='[[3k25]], [[Resolution|resolution]] 2.55Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3k25]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K25 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3K25 FirstGlance]. <br> |
| - | [[3k25]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp. Synechocystis sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3K25 OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | [[ | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | [[Category: Acton, T B | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">slr1438 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1143 Synechocystis sp.])</td></tr> |
| - | [[Category: Belote, R L | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3k25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3k25 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3k25 RCSB], [http://www.ebi.ac.uk/pdbsum/3k25 PDBsum]</span></td></tr> |
| - | [[Category: Ciccosanti,C | + | </table> |
| - | [[Category: Everett, J K | + | == Evolutionary Conservation == |
| - | [[Category: Hunt, J F | + | [[Image:Consurf_key_small.gif|200px|right]] |
| - | [[Category: Kuzin, A | + | Check<jmol> |
| - | [[Category: Montelione, G T | + | <jmolCheckbox> |
| - | [[Category: | + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k2/3k25_consurf.spt"</scriptWhenChecked> |
| - | [[Category: Nair, R | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [[Category: Rost, B | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | [[Category: Sahdev, S | + | </jmolCheckbox> |
| - | [[Category: Seetharaman, J | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. |
| - | [[Category: Su, M | + | <div style="clear:both"></div> |
| - | [[Category: Tong, L | + | __TOC__ |
| - | [[Category: Xiao, R | + | </StructureSection> |
| + | [[Category: Synechocystis sp]] | ||
| + | [[Category: Acton, T B]] | ||
| + | [[Category: Belote, R L]] | ||
| + | [[Category: Ciccosanti,C]] | ||
| + | [[Category: Everett, J K]] | ||
| + | [[Category: Hunt, J F]] | ||
| + | [[Category: Kuzin, A]] | ||
| + | [[Category: Montelione, G T]] | ||
| + | [[Category: Structural genomic]] | ||
| + | [[Category: Nair, R]] | ||
| + | [[Category: Rost, B]] | ||
| + | [[Category: Sahdev, S]] | ||
| + | [[Category: Seetharaman, J]] | ||
| + | [[Category: Su, M]] | ||
| + | [[Category: Tong, L]] | ||
| + | [[Category: Xiao, R]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: Northeast structural genomics consortium]] | ||
[[Category: P73504_syny3]] | [[Category: P73504_syny3]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
[[Category: Sgr112]] | [[Category: Sgr112]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 15:26, 18 December 2014
Crystal Structure of Slr1438 protein from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR112
| |||||||||||
Categories: Synechocystis sp | Acton, T B | Belote, R L | Ciccosanti,C | Everett, J K | Hunt, J F | Kuzin, A | Montelione, G T | Structural genomic | Nair, R | Rost, B | Sahdev, S | Seetharaman, J | Su, M | Tong, L | Xiao, R | Nesg | P73504 syny3 | PSI, Protein structure initiative | Sgr112 | Unknown function

